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This paper proposes a machine learning (ML) method to predict stable molecular geometries from their chemical composition. The method is useful for generating molecular conformations which may serve as initial geometries for saving time…

In nuclear and particle physics, reconciling sophisticated simulations with experimental data is vital for understanding complex systems like the Quark Gluon Plasma (QGP) generated in heavy-ion collisions. However, computational demands…

Nuclear Theory · Physics 2026-02-03 Hendrik Roch , Syed Afrid Jahan , Chun Shen

Machine learning has had an enormous impact in many scientific disciplines. Also in the field of low-temperature plasma modeling and simulation it has attracted significant interest within the past years. Whereas its application should be…

Plasma Physics · Physics 2023-12-18 Jan Trieschmann , Luca Vialetto , Tobias Gergs

Rapidly applying the effects of detector response to physics objects (e.g. electrons, muons, showers of particles) is essential in high energy physics. Currently available tools for the transformation from truth-level physics objects to…

Data Analysis, Statistics and Probability · Physics 2020-07-07 D. Benjamin , S. V. Chekanov , W. Hopkins , Y. Li , J. R. Love

Computer-aided engineering techniques are indispensable in modern engineering developments. In particular, partial differential equations are commonly used to simulate the dynamics of physical phenomena, but very large systems are often…

Quantum Physics · Physics 2022-04-26 Yuki Sato , Ruho Kondo , Satoshi Koide , Hideki Takamatsu , Nobuyuki Imoto

We present an algorithm for computing melting points by autonomously learning from coexistence simulations in the NPT ensemble. Given the interatomic interaction model, the method makes decisions regarding the number of atoms and…

Materials Science · Physics 2023-10-16 Olga Klimanova , Timofei Miryashkin , Alexander Shapeev

Nuclear materials are often demanded to function for extended time in extreme environments, including high radiation fluxes and transmutation, high temperature and temperature gradients, stresses, and corrosive coolants. They also have a…

Materials Science · Physics 2022-11-18 Dane Morgan , Ghanshyam Pilania , Adrien Couet , Blas P. Uberuaga , Cheng Sun , Ju Li

Newton's Method is widely used to find the solution of complex non-linear simulation problems in Computer Graphics. To guarantee a descent direction, it is common practice to clamp the negative eigenvalues of each element Hessian prior to…

Graphics · Computer Science 2026-05-26 José Antonio Fernández-Fernández , Fabian Löschner , Jan Bender

Simulating the dynamics of ions near polarizable nanoparticles (NPs) using coarse-grained models is extremely challenging due to the need to solve the Poisson equation at every simulation timestep. Recently, a molecular dynamics (MD) method…

Computational Physics · Physics 2019-11-01 JCS Kadupitiya , Geoffrey C. Fox , Vikram Jadhao

We present a novel deep learning approach to approximate the solution of large, sparse, symmetric, positive-definite linear systems of equations. These systems arise from many problems in applied science, e.g., in numerical methods for…

Machine Learning · Computer Science 2022-10-04 Ayano Kaneda , Osman Akar , Jingyu Chen , Victoria Kala , David Hyde , Joseph Teran

The present paper describes a parallel unstructured-mesh Plasma simulation code based on Finite Volume method. The code dynamically refines and coarses mesh for accurate resolution of the different features regarding the electron density.…

Computational Physics · Physics 2022-12-26 Imad Kissami , Souhail Maazioui , Fayssal Benkhaldoun

Low-temperature plasmas are partially ionized gases, where ions and neutrals coexist in a highly reactive environment. This creates a rich chemistry, which is often difficult to understand in its full complexity. In this work, we develop a…

Plasma Physics · Physics 2024-09-13 Diogo R. Ferreira , Alexandre Lança , Luís Lemos Alves

Accurate molecular property predictions require 3D geometries, which are typically obtained using expensive methods such as density functional theory (DFT). Here, we attempt to obtain molecular geometries by relying solely on machine…

Modeling plasmas in terms of atoms or ions is theoretically appealing for several reasons. When it is relevant, the notion of atom or ion in a plasma provides us with an interpretation scheme of the plasma's microscopic structure. From the…

Plasma Physics · Physics 2024-12-18 Robin Piron

The interpretation of deep learning as a dynamical system has gained a considerable attention in recent years as it provides a promising framework. It allows for the use of existing ideas from established fields of mathematics for studying…

Optimization and Control · Mathematics 2021-06-09 Nader Ganaba

Discretization of non-linear Poisson-Boltzmann Equation equations results in a system of non-linear equations with symmetric Jacobian. The Newton algorithm is the most useful tool for solving non-linear equations. It consists of solving a…

Mathematical Physics · Physics 2007-05-23 Sanjay Kumar Khattri

We study how much a linear program (LP) can be compressed when solved repeatedly, given prior knowledge about its objective function. Existing data-driven projection methods learn low-dimensional surrogate LPs with approximate…

Optimization and Control · Mathematics 2026-05-26 Yuhan Ye , Omar Bennouna

Accurate models of the scrape-off layer are required for the design and operation of tokamak fusion reactors. Scrape-off layer simulations are computationally expensive, difficult to operate and suffer from numerical instabilities. A…

Plasma Physics · Physics 2026-04-22 Stefan Dasbach , Sebastijan Brezinsek , Yunfeng Liang , Dirk Reiser , Sven Wiesen

This work deals with the modeling of plasmas, which are charged-particle fluids. Thanks to machine leaning, we construct a closure for the one-dimensional Euler-Poisson system valid for a wide range of collision regimes. This closure, based…

Numerical Analysis · Mathematics 2020-11-13 Léo Bois , Emmanuel Franck , Laurent Navoret , Vincent Vigon

A new approach to building explicit time-marching stencil computation schemes for the transient 2D acoustic wave equation is implemented. It is based on using Poisson's formula and its three time level modification combined with polynomial…

Numerical Analysis · Mathematics 2019-06-19 Naum M. Khutoryansky