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Clinical notes contain valuable unstructured information. Named entity recognition (NER) enables the automatic extraction of medical concepts; however, benchmarks for Portuguese remain scarce. In this study, we aimed to evaluate BERT-based…

The field of clinical natural language processing has been advanced significantly since the introduction of deep learning models. The self-supervised representation learning and the transfer learning paradigm became the methods of choice in…

Computation and Language · Computer Science 2020-04-27 Andrey Kormilitzin , Nemanja Vaci , Qiang Liu , Alejo Nevado-Holgado

This article reviews recent advances in applying natural language processing (NLP) to Electronic Health Records (EHRs) for computational phenotyping. NLP-based computational phenotyping has numerous applications including diagnosis…

Computation and Language · Computer Science 2018-06-18 Zexian Zeng , Yu Deng , Xiaoyu Li , Tristan Naumann , Yuan Luo

Large scale contextual representation models, such as BERT, have significantly advanced natural language processing (NLP) in recently years. However, in certain area like healthcare, accessing diverse large scale text data from multiple…

Computation and Language · Computer Science 2020-02-21 Dianbo Liu , Tim Miller

As an essential task for the architecture, engineering, and construction (AEC) industry, information retrieval (IR) from unstructured textual data based on natural language processing (NLP) is gaining increasing attention. Although various…

Computation and Language · Computer Science 2022-06-22 Zhe Zheng , Xin-Zheng Lu , Ke-Yin Chen , Yu-Cheng Zhou , Jia-Rui Lin

Diabetes is a chronic disease with a significant global health burden, requiring multi-stakeholder collaboration for optimal management. Large language models (LLMs) have shown promise in various healthcare scenarios, but their…

Computation and Language · Computer Science 2025-03-14 Lai Wei , Zhen Ying , Muyang He , Yutong Chen , Qian Yang , Yanzhe Hong , Jiaping Lu , Kaipeng Zheng , Shaoting Zhang , Xiaoying Li , Weiran Huang , Ying Chen

Pre-trained models have demonstrated their effectiveness in many downstream natural language processing (NLP) tasks. The availability of multilingual pre-trained models enables zero-shot transfer of NLP tasks from high resource languages to…

Computation and Language · Computer Science 2020-04-30 Ke Tran

Natural language processing (NLP) of clinical trial documents can be useful in new trial design. Here we identify entity types relevant to clinical trial design and propose a framework called CT-BERT for information extraction from clinical…

Quantitative Methods · Quantitative Biology 2021-10-20 Xiong Liu , Greg L. Hersch , Iya Khalil , Murthy Devarakonda

Background: Natural Language Processing (NLP) is widely used to extract clinical insights from Electronic Health Records (EHRs). However, the lack of annotated data, automated tools, and other challenges hinder the full utilisation of NLP…

Computation and Language · Computer Science 2023-06-23 Elias Hossain , Rajib Rana , Niall Higgins , Jeffrey Soar , Prabal Datta Barua , Anthony R. Pisani , Ph. D , Kathryn Turner}

The emerging classical-quantum transfer learning paradigm has brought a decent performance to quantum computational models in many tasks, such as computer vision, by enabling a combination of quantum models and classical pre-trained neural…

Quantum Physics · Physics 2023-02-28 Qiuchi Li , Benyou Wang , Yudong Zhu , Christina Lioma , Qun Liu

In this paper, we consider enhancing medical visual-language pre-training (VLP) with domain-specific knowledge, by exploiting the paired image-text reports from the radiological daily practice. In particular, we make the following…

Image and Video Processing · Electrical Eng. & Systems 2023-04-04 Chaoyi Wu , Xiaoman Zhang , Ya Zhang , Yanfeng Wang , Weidi Xie

Research on developmentally plausible language models has largely focused on English, leaving open questions about multilingual settings. We present a systematic study of compact language models by extending BabyBERTa to English-French…

Computation and Language · Computer Science 2026-03-16 Liel Binyamin , Elior Sulem

This study investigates the computational processing of euphemisms, a universal linguistic phenomenon, across multiple languages. We train a multilingual transformer model (XLM-RoBERTa) to disambiguate potentially euphemistic terms (PETs)…

Translating electronic health record (EHR) narratives from English to Spanish is a clinically important yet challenging task due to the lack of a parallel-aligned corpus and the abundant unknown words contained. To address such challenges,…

Computation and Language · Computer Science 2025-08-27 Rumeng Li , Xun Wang , Hong Yu

Pre-trained word embeddings are the primary method for transfer learning in several Natural Language Processing (NLP) tasks. Recent works have focused on using unsupervised techniques such as language modeling to obtain these embeddings. In…

Computation and Language · Computer Science 2019-07-01 Mihir Kale , Aditya Siddhant , Sreyashi Nag , Radhika Parik , Matthias Grabmair , Anthony Tomasic

Language models have become a key step to achieve state-of-the art results in many different Natural Language Processing (NLP) tasks. Leveraging the huge amount of unlabeled texts nowadays available, they provide an efficient way to…

Massive digital data processing provides a wide range of opportunities and benefits, but at the cost of endangering personal data privacy. Anonymisation consists in removing or replacing sensitive information from data, enabling its…

Computation and Language · Computer Science 2020-03-18 Aitor García-Pablos , Naiara Perez , Montse Cuadros

The field of natural language processing (NLP) has made significant progress with the rapid development of deep learning technologies. One of the research directions in text sentiment analysis is sentiment analysis of medical texts, which…

Computation and Language · Computer Science 2024-12-04 Yinan Chen

Natural Language Processing (NLP) systems often make use of machine learning techniques that are unfamiliar to end-users who are interested in analyzing clinical records. Although NLP has been widely used in extracting information from…

Human-Computer Interaction · Computer Science 2017-07-10 Gaurav Trivedi , Phuong Pham , Wendy Chapman , Rebecca Hwa , Janyce Wiebe , Harry Hochheiser

Clinical language models are important for many applications in healthcare, but their development depends on access to extensive clinical text for pretraining. However, obtaining clinical notes from electronic health records (EHRs) at scale…

Computation and Language · Computer Science 2024-12-02 Jinghui Liu , Anthony Nguyen