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Related papers: Proteinoid microspheres as proto-neural networks

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Cortical prostheses are devices implanted in the visual cortex that attempt to restore lost vision by electrically stimulating neurons. Currently, the vision provided by these devices is limited, and accurately predicting the visual…

Neurons and Cognition · Quantitative Biology 2022-09-28 Jacob Granley , Alexander Riedel , Michael Beyeler

Spectroscopic properties of molecules holds great importance for the description of the molecular response under the effect of an UV/Vis electromagnetic radiation. Computationally expensive ab initio (e.g. MultiConfigurational SCF, Coupled…

Molecular dynamics (MD) simulation, which is considered an important tool for studying physical and chemical processes at the atomic scale, requires accurate calculations of energies and forces. Although reliable energies and forces can be…

Materials Science · Physics 2021-12-06 Van-Quyen Nguyen , Viet-Cuong Nguyen , Tien-Cuong Nguyen , Tien-Lam Pham

This document is a joint response by scientists from the Princeton Plasma Physics Laboratory, IBM T. J. Watson Research Center and Applied Materials, Inc. to the DOE Office of Science (DOE-SC) Request for Information: Basic Research…

We present a novel microplasma flow reactor using a dielectric barrier discharge (DBD) driven by repetitively nanosecond high-voltage pulses. Our DBD-based geometry can generate a non-thermal plasma discharge at atmospheric pressure and…

Plasma Physics · Physics 2018-06-13 A. Elkholy , E. van Veldhuizen , S. Nijdam , U. Ebert , J. van Oijen , N. Dam , L. Philip H. de Goey

The ever-increasing demand for Artificial Intelligence (AI) systems is underlining a significant requirement for new, AI-optimised hardware. Neuromorphic (brain-like) processors are one highly-promising solution, with photonic-enabled…

Emerging Technologies · Computer Science 2021-10-06 Joshua Robertson , Paul Kirkland , Juan Arturo Alanis , Matěj Hejda , Julián Bueno , Gaetano Di Caterina , Antonio Hurtado

Manipulating vector beams is pivotal in fields such as particle manipulation, image processing, and quantum communication. Flexibly adjusting the intensity distribution of these beams is crucial for effectively realizing these applications.…

Optics · Physics 2024-12-16 Chen Qing , Jialong Cui , Lishuang Feng , Dengke Zhang

The extraction of interactions between chemicals and proteins from several biomedical articles is important in many fields of biomedical research such as drug development and prediction of drug side effects. Several natural language…

Computation and Language · Computer Science 2020-11-05 Dongha Choi , Hyunju Lee

Owing to their significant advantages in terms of bandwidth, power efficiency, and latency, optical neuromorphic systems have arisen as interesting alternatives to digital electronic devices. Recently, photonic crystal nanolasers with…

Optics · Physics 2025-12-09 Ivan K. Boikov , Alfredo de Rossi , Mihai A. Petrovici

This paper examines the modulation of proteinoid spiking frequency in response to light. Proteinoids are proteins formed through thermal condensation of amino acids and have been found to exhibit spiking behaviour in response to various…

Emerging Technologies · Computer Science 2023-05-05 Panagiotis Mougkogiannis , Andrew Adamatzky

Convolutional neural networks (CNNs) have been widely applied in the computer vision community to solve complex problems in image recognition and analysis. We describe an application of the CNN technology to the problem of identifying…

High Energy Physics - Experiment · Physics 2016-09-07 A. Aurisano , A. Radovic , D. Rocco , A. Himmel , M. D. Messier , E. Niner , G. Pawloski , F. Psihas , A. Sousa , P. Vahle

In this paper, a multiscale virtual particle based elastic network model (MVP-ENM) is proposed for biomolecular normal mode analysis. The multiscale virtual particle model is proposed for the discretization of biomolecular density data in…

Biomolecules · Quantitative Biology 2019-03-13 Kelin Xia

Structural relationships among proteins are important in the study of their evolution as well as in drug design and development. The protein 3D structure has been shown to be effective with respect to classifying proteins. Prior work has…

Biomolecules · Quantitative Biology 2016-02-26 James DeFelice , Vicente M. Reyes

A major part of membrane function is conducted by proteins, both integral and peripheral. Peripheral membrane proteins temporarily adhere to biological membranes, either to the lipid bilayer or to integral membrane proteins with…

Biomolecules · Quantitative Biology 2014-06-27 Katerina C. Nastou , Georgios N. Tsaousis , Kimon E. Kremizas , Zoi I. Litou , Stavros J. Hamodrakas

We present a theory of the dielectric response of a solution containing large solutes, of a nanometer size, in a molecular solvent. It combines the molecular dipole moment of the solute with the polarization of a large subensemble of…

Biological Physics · Physics 2015-06-04 Dmitry V. Matyushov

Cryo-electron microscopy (cryo-EM) allows for the high-resolution reconstruction of 3D structures of proteins and other biomolecules. Successful reconstruction of both shape and movement greatly helps understand the fundamental processes of…

Computer Vision and Pattern Recognition · Computer Science 2023-10-12 Xinhang Liu , Yan Zeng , Yifan Qin , Hao Li , Jiakai Zhang , Lan Xu , Jingyi Yu

Empirical scoring functions based on either molecular force fields or cheminformatics descriptors are widely used, in conjunction with molecular docking, during the early stages of drug discovery to predict potency and binding affinity of a…

Machine Learning · Computer Science 2017-03-31 Joseph Gomes , Bharath Ramsundar , Evan N. Feinberg , Vijay S. Pande

Designing molecules that bind to specific target proteins is a fundamental task in drug discovery. Recent models leverage geometric constraints to generate ligand molecules that bind cohesively with specific protein pockets. However, these…

Biomolecules · Quantitative Biology 2023-04-26 Fang Sun , Zhihao Zhan , Hongyu Guo , Ming Zhang , Jian Tang

After initial proof-of-principle demonstrations, optically pumped nitrogen-vacancy (NV) centres in diamond have been proposed as a non-invasive platform to achieve hyperpolarisation of nuclear spins in molecular samples over macroscopic…

Mesoscale and Nanoscale Physics · Physics 2021-01-27 J. -P. Tetienne , L. T. Hall , A. J. Healey , G. A. L. White , M. -A. Sani , F. Separovic , L. C. L. Hollenberg

Machine learning methods have shown promise in predicting molecular properties, and given sufficient training data machine learning approaches can enable rapid high-throughput virtual screening of large libraries of compounds. Graph-based…

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