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Finite element methods require the composition of the global stiffness matrix from local finite element contributions. The composition process combines the computation of element stiffness matrices and their assembly into the global…

Numerical Analysis · Mathematics 2021-07-16 Adam Sky , César Polindara , Ingo Muench , Carolin Birk

This paper considers flow problems in multiscale heterogeneous porous media. The multiscale nature of the modeled process significantly complicates numerical simulations due to the need to compute huge and ill-conditioned sparse matrices,…

Numerical Analysis · Mathematics 2024-10-16 Djulustan Nikiforov , Leonardo A. Poveda , Dmitry Ammosov , Yesy Sarmiento , Juan Galvis

LU factorization for sparse matrices is the most important computing step for many engineering and scientific computing problems such as circuit simulation. But parallelizing LU factorization with the Graphic Processing Units (GPU) still…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-02-14 Shaoyi Peng , Sheldon X. -D. Tan

Immersed finite element methods provide a convenient analysis framework for problems involving geometrically complex domains, such as those found in topology optimization and microstructures for engineered materials. However, their…

Numerical Analysis · Mathematics 2025-01-30 Nils Wunsch , Keenan Doble , Mathias R. Schmidt , Lise Noël , John A. Evans , Kurt Maute

In this work, we investigate the potential utility of parallelization for meeting real-time constraints and minimizing energy. We consider malleable Gang scheduling of implicit-deadline sporadic tasks upon multiprocessors. We first show the…

Operating Systems · Computer Science 2013-02-08 Nathan Fisher , Joël Goossens , Pradeep M. Hettiarachchi , Antonio Paolillo

Incomplete LU factorizations of sparse matrices are widely used as preconditioners in Krylov subspace methods to speed up solving linear systems. Unfortunately, computing the preconditioner itself can be time-consuming and sensitive to…

Machine Learning · Computer Science 2024-12-12 Paul Häusner , Aleix Nieto Juscafresa , Jens Sjölund

We demonstrate an FPGA implementation of a parallel and reconfigurable architecture for sparse neural networks, capable of on-chip training and inference. The network connectivity uses pre-determined, structured sparsity to significantly…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-04-29 Sourya Dey , Diandian Chen , Zongyang Li , Souvik Kundu , Kuan-Wen Huang , Keith M. Chugg , Peter A. Beerel

Electrostatic interactions play crucial roles in biophysical processes such as protein folding and molecular recognition. Poisson-Boltzmann equation (PBE)-based models have emerged as widely used in modeling these important processes.…

Computational Physics · Physics 2017-04-11 Ruxi Qi , Wesley M. Botello-Smith , Ray Luo

In this work, we present a parallel, fully-distributed finite element numerical framework to simulate the low-frequency electromagnetic response of superconducting devices, which allows to efficiently exploit HPC platforms. We select the…

Computational Engineering, Finance, and Science · Computer Science 2018-04-13 Marc Olm , Santiago Badia , Alberto F. Martín

Cholesky factorization is a widely used method for solving linear systems involving symmetric, positive-definite matrices, and can be an attractive choice in applications where a high degree of numerical stability is needed. One such…

Numerical Analysis · Mathematics 2023-05-09 Felix Liu , Albin Fredriksson , Stefano Markidis

Parallel algorithms on CPU and GPU are implemented for the Unified Gas-Kinetic Scheme and their performances are investigated and compared by a two dimensional channel flow case. The parallel CPU algorithm has a one dimensional block…

Computational Physics · Physics 2018-11-02 Jizhou Liu , Fang Q. Hu , Xiaodong Li

Implicit methods and GPU parallelization are two distinct yet powerful strategies for accelerating high-order CFD algorithms. However, few studies have successfully integrated both approaches within high-speed flow solvers. The core…

Numerical Analysis · Mathematics 2025-09-09 Hongyu Liu , Xing Ji , Yuan Fu , Kun Xu

Dynamic programming (DP) is a cornerstone of combinatorial optimization, yet its inherently sequential structure has long limited its scalability in scenario-based stochastic programming (SP). This paper introduces a GPU-accelerated…

Optimization and Control · Mathematics 2025-11-25 Jingyi Zhao , Linxin Yang , Haohua Zhang , Tian Ding

As integrated circuits become increasingly complex, the demand for efficient and accurate simulation solvers continues to rise. Traditional solvers often struggle with large-scale sparse systems, leading to prolonged simulation times and…

Numerical Analysis · Mathematics 2025-09-12 Zijian Zhang , Rui Hong , Xuesong Chen , Shuting Cai

Sustaining a large fraction of single GPU performance in parallel computations is considered to be the major problem of GPU-based clusters. In this article, this topic is addressed in the context of a lattice Boltzmann flow solver that is…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-03-01 Christian Feichtinger , Johannes Habich , Harald Koestler , Georg Hager , Ulrich Ruede , Gerhard Wellein

In recent years, mesh subdivision---the process of forging smooth free-form surfaces from coarse polygonal meshes---has become an indispensable production instrument. Although subdivision performance is crucial during simulation, animation…

Graphics · Computer Science 2019-01-17 Daniel Mlakar , Martin Winter , Hans-Peter Seidel , Markus Steinberger , Rhaleb Zayer

To train modern large DNN models, pipeline parallelism has recently emerged, which distributes the model across GPUs and enables different devices to process different microbatches in pipeline. Earlier pipeline designs allow multiple…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-08-23 Ziyue Luo , Xiaodong Yi , Guoping Long , Shiqing Fan , Chuan Wu , Jun Yang , Wei Lin

Particle accelerator modeling is an important field of research and development, essential to investigating, designing and operating some of the most complex scientific devices ever built. Kinetic simulations of relativistic, charged…

Accelerator Physics · Physics 2024-05-02 Ryan T. Sandberg , Remi Lehe , Chad E. Mitchell , Marco Garten , Andrew Myers , Ji Qiang , Jean-Luc Vay , Axel Huebl

Graph coloring has been broadly used to discover concurrency in parallel computing. To speedup graph coloring for large-scale datasets, parallel algorithms have been proposed to leverage modern GPUs. Existing GPU implementations either have…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-01-22 Xuhao Chen , Pingfan Li , Jianbin Fang , Tao Tang , Zhiying Wang , Canqun Yang

Full-wave 3D electromagnetic simulations of complex planar devices, multilayer interconnects, and chip packages are presented for wide-band frequency-domain analysis using the finite difference integration technique developed in the PETSc…

Computational Engineering, Finance, and Science · Computer Science 2017-05-25 Amir Geranmayeh
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