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MIML library is a Java software tool to develop, test, and compare classification algorithms for multi-instance multi-label (MIML) learning. The library includes 43 algorithms and provides a specific format and facilities for data managing…

Machine Learning · Computer Science 2024-02-14 Álvaro Belmonte , Amelia Zafra , Eva Gibaja

Deep Learning Library (DLL) is a new library for machine learning with deep neural networks that focuses on speed. It supports feed-forward neural networks such as fully-connected Artificial Neural Networks (ANNs) and Convolutional Neural…

Machine Learning · Computer Science 2018-04-15 Baptiste Wicht , Jean Hennebert , Andreas Fischer

Machine learning (ML) research and application often involve time-consuming steps such as model architecture prototyping, feature selection, and dataset preparation. To support these tasks, we introduce the Deep Fast Machine Learning Utils…

Machine Learning · Computer Science 2024-09-17 Fabi Prezja

MDL, Multimodal Deep Learning Library, is a deep learning framework that supports multiple models, and this document explains its philosophy and functionality. MDL runs on Linux, Mac, and Unix platforms. It depends on OpenCV.

Machine Learning · Computer Science 2016-04-13 Jian Jin

BioImageLoader (BIL) is a python library that handles bioimage datasets for machine learning applications, easing simple workflows and enabling complex ones. BIL attempts to wrap the numerous and varied bioimages datasets in unified…

Quantitative Methods · Quantitative Biology 2023-03-07 Seongbin Lim , Xingjian Zhang , Emmanuel Beaurepaire , Anatole Chessel

Motivation: This paper presents libRoadRunner 2.0, an extensible, high-performance, cross-platform, open-source software library for the simulation and analysis of models expressed using Systems Biology Markup Language SBML). Results:…

Quantitative Methods · Quantitative Biology 2022-03-03 Ciaran Welsh , Jin Xu , Lucian Smith , Matthias König , Kiri Choi , Herbert M. Sauro

DiffEqFlux.jl is a library for fusing neural networks and differential equations. In this work we describe differential equations from the viewpoint of data science and discuss the complementary nature between machine learning models and…

Machine Learning · Computer Science 2019-02-08 Chris Rackauckas , Mike Innes , Yingbo Ma , Jesse Bettencourt , Lyndon White , Vaibhav Dixit

MLJ (Machine Learing in Julia) is an open source software package providing a common interface for interacting with machine learning models written in Julia and other languages. It provides tools and meta-algorithms for selecting, tuning,…

Machine Learning · Computer Science 2020-12-01 Anthony D. Blaom , Franz Kiraly , Thibaut Lienart , Yiannis Simillides , Diego Arenas , Sebastian J. Vollmer

This paper presents libRoadRunner, an extensible, high-performance, cross-platform, open-source software library for the simulation and analysis of models \ expressed using Systems Biology Markup Language (SBML). SBML is the most widely…

Subcellular Processes · Quantitative Biology 2015-03-04 Endre T. Somogyi , Jean-Marie Bouteiller , James A. Glazier , Matthias König , Kyle Medley , Maciej H. Swat , Herbert M. Sauro

Recent technological advancements in data acquisition tools allowed life scientists to acquire multimodal data from different biological application domains. Broadly categorized in three types (i.e., sequences, images, and signals), these…

Quantitative Methods · Quantitative Biology 2020-03-03 Mufti Mahmud , M Shamim Kaiser , Amir Hussain

We present "DistML.js", a library designed for training and inference of machine learning models within web browsers. Not only does DistML.js facilitate model training on local devices, but it also supports distributed learning through…

Machine Learning · Computer Science 2024-07-02 Masatoshi Hidaka , Tomohiro Hashimoto , Yuto Nishizawa , Tatsuya Harada

We present MultiObjectiveAlgorithms.jl, an open-source Julia library for solving multi-objective optimization problems written in JuMP. MultiObjectiveAlgorithms.jl implements a number of different solution algorithms, which all rely on an…

Optimization and Control · Mathematics 2026-05-26 Oscar Dowson , Xavier Gandibleux , Gökhan Kof

PowerDynamics.jl is an Open-Source library for dynamic power grid modeling built in the latest scientific programming language, Julia. It provides all the tools necessary to analyze the dynamical stability of power grids with high share of…

Systems and Control · Electrical Eng. & Systems 2020-12-10 Tim Kittel , Sabine Auer , Christina Horn

Artificial intelligence (AI) techniques are widely applied in the life sciences. However, applying innovative AI techniques to understand and deconvolute biological complexity is hindered by the learning curve for life science scientists to…

Artificial Intelligence · Computer Science 2024-03-28 Nisha Pillai , Athish Ram Das , Moses Ayoola , Ganga Gireesan , Bindu Nanduri , Mahalingam Ramkumar

There are plenty of excellent plotting libraries. Each excels at a different use case: one is good for printed 2D publication figures, the other at interactive 3D graphics, a third has excellent L A TEX integration or is good for creating…

PowerSimulations.jl is a Julia-based BSD-licensed power system operations simulation tool developed as a flexible and open source software for quasi-static power systems simulations including Production Cost Models. PowerSimulations.jl…

Systems and Control · Electrical Eng. & Systems 2024-04-05 Jose Daniel Lara , Clayton Barrows , Daniel Thom , Sourabh Dalvi , Duncan S. Callaway , Dheepak Krishnamurthy

Detecting microbial biomarkers used to predict disease phenotypes and clinical outcomes is crucial for disease early-stage screening and diagnosis. Most methods for biomarker identification are linear-based, which is very limited as…

Quantitative Methods · Quantitative Biology 2021-09-29 Jian Jiang

Interest in deploying Deep Neural Network (DNN) inference on edge devices has resulted in an explosion of the number and types of hardware platforms to use. While the high-level programming interface, such as TensorFlow, can be readily…

Mathematical Software · Computer Science 2023-03-09 Upasana Sridhar , Nicholai Tukanov , Elliott Binder , Tze Meng Low , Scott McMillan , Martin D. Schatz

For scientific machine learning tasks with a lot of custom code, picking the right Automatic Differentiation (AD) system matters. Our Julia package DifferentiationInterface$.$jl provides a common frontend to a dozen AD backends, unlocking…

Mathematical Software · Computer Science 2025-05-19 Guillaume Dalle , Adrian Hill

In recent years, Deep Learning (DL) has found great success in domains such as multimedia understanding. However, the complex nature of multimedia data makes it difficult to develop DL-based software. The state-of-the art tools, such as…

Programming Languages · Computer Science 2017-01-10 Tian Zhao , Xiaobing Huang , Yu Cao
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