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Deep learning has revolutionized biomedical research by providing sophisticated methods to handle complex, high-dimensional data. Multimodal deep learning (MDL) further enhances this capability by integrating diverse data types such as…

Machine Learning · Computer Science 2026-03-13 Valerio Guarrasi , Fatih Aksu , Camillo Maria Caruso , Francesco Di Feola , Aurora Rofena , Filippo Ruffini , Paolo Soda

Deep learning (DL) becomes increasingly pervasive, being used in a wide range of software applications. These software applications, named as DL based software (in short as DL software), integrate DL models trained using a large data corpus…

Software Engineering · Computer Science 2020-11-12 Zhenpeng Chen , Yanbin Cao , Yuanqiang Liu , Haoyu Wang , Tao Xie , Xuanzhe Liu

We present the preliminary high-level design and features of DynamicPPL.jl, a modular library providing a lightning-fast infrastructure for probabilistic programming. Besides a computational performance that is often close to or better than…

Machine Learning · Computer Science 2020-02-10 Mohamed Tarek , Kai Xu , Martin Trapp , Hong Ge , Zoubin Ghahramani

We present \texttt{MathOptAI.jl}, an open-source Julia library for embedding trained machine learning predictors into a JuMP model. \texttt{MathOptAI.jl} can embed a wide variety of neural networks, decision trees, and Gaussian Processes…

Machine Learning · Computer Science 2026-05-26 Oscar Dowson , Robert B Parker , Russel Bent

Deep learning software demands reliability and performance. However, many of the existing deep learning frameworks are software libraries that act as an unsafe DSL in Python and a computation graph interpreter. We present DLVM, a design and…

Programming Languages · Computer Science 2018-02-06 Richard Wei , Lane Schwartz , Vikram Adve

We release a new Bayesian neural network library for PyTorch for large-scale deep networks. Our library implements mainstream approximate Bayesian inference algorithms: variational inference, MC-dropout, stochastic-gradient MCMC, and…

Machine Learning · Computer Science 2023-09-25 Minyoung Kim , Timothy Hospedales

We explore the use of multiple deep learning models for detecting flaws in software programs. Current, standard approaches for flaw detection rely on a single representation of a software program (e.g., source code or a program binary). We…

Machine Learning · Computer Science 2020-09-23 Scott Heidbrink , Kathryn N. Rodhouse , Daniel M. Dunlavy

NengoDL is a software framework designed to combine the strengths of neuromorphic modelling and deep learning. NengoDL allows users to construct biologically detailed neural models, intermix those models with deep learning elements (such as…

Neural and Evolutionary Computing · Computer Science 2019-03-28 Daniel Rasmussen

InvertibleNetworks.jl is a Julia package designed for the scalable implementation of normalizing flows, a method for density estimation and sampling in high-dimensional distributions. This package excels in memory efficiency by leveraging…

Machine Learning · Computer Science 2023-12-22 Rafael Orozco , Philipp Witte , Mathias Louboutin , Ali Siahkoohi , Gabrio Rizzuti , Bas Peters , Felix J. Herrmann

Deep Learning (DL) developers come from different backgrounds, e.g., medicine, genomics, finance, and computer science. To create a DL model, they must learn and use high-level programming languages (e.g., Python), thus needing to handle…

Human-Computer Interaction · Computer Science 2023-03-24 Tommaso Calò , Luigi De Russis

NetworkDynamics.jl is an easy-to-use and computationally efficient package for working with heterogeneous dynamical systems on complex networks, written in Julia, a high-level, high-performance, dynamic programming language. By combining…

Mathematical Software · Computer Science 2021-07-02 Michael Lindner , Lucas Lincoln , Fenja Drauschke , Julia Monika Koulen , Hans Würfel , Anton Plietzsch , Frank Hellmann

Virtual reality (VR) offers immersive visualization and intuitive interaction. We leverage VR to enable any biomedical professional to deploy a deep learning (DL) model for image classification. While DL models can be powerful tools for…

Machine Learning · Computer Science 2022-06-22 Kevin C. VanHorn , Meyer Zinn , Murat Can Cobanoglu

Clinical adoption of deep learning models has been hindered, in part, because the black-box nature of neural networks leads to concerns regarding their trustworthiness and reliability. These concerns are particularly relevant in the field…

Image and Video Processing · Electrical Eng. & Systems 2024-06-27 Lindsay Munroe , Mariana da Silva , Faezeh Heidari , Irina Grigorescu , Simon Dahan , Emma C. Robinson , Maria Deprez , Po-Wah So

The fast-paced development of machine learning (ML) methods coupled with its increasing adoption in research poses challenges for researchers without extensive training in ML. In neuroscience, for example, ML can help understand…

Machine Learning · Computer Science 2023-10-20 Sami Hamdan , Shammi More , Leonard Sasse , Vera Komeyer , Kaustubh R. Patil , Federico Raimondo

Deep learning (DL) along with never-ending advancements in computational processing and cloud technologies have bestowed us powerful analyzing tools and techniques in the past decade and enabled us to use and apply them in various fields of…

Machine Learning · Computer Science 2023-02-23 Farzan Shenavarmasouleh , Farid Ghareh Mohammadi , Khaled M. Rasheed , Hamid R. Arabnia

Deep learning (DL) is becoming increasingly popular in several application domains and has made several new application features involving computer vision, speech recognition and synthesis, self-driving automobiles, drug design, etc.…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-09-17 K. R. Jayaram , Vinod Muthusamy , Parijat Dube , Vatche Ishakian , Chen Wang , Benjamin Herta , Scott Boag , Diana Arroyo , Asser Tantawi , Archit Verma , Falk Pollok , Rania Khalaf

While there exist a plethora of deep learning tools and frameworks, the fast-growing complexity of the field brings new demands and challenges, such as more flexible network design, speedy computation on distributed setting, and…

Deep learning hyper-parameter optimization is a tough task. Finding an appropriate network configuration is a key to success, however most of the times this labor is roughly done. In this work we introduce a novel library to tackle this…

Machine Learning · Computer Science 2018-07-11 Andrés Camero , Jamal Toutouh , Enrique Alba

This paper presents aplib, a Java library for programming intelligent agents, featuring BDI and multi agency, but adding on top of it a novel layer of tactical programming inspired by the domain of theorem proving. Aplib is also implemented…

Artificial Intelligence · Computer Science 2019-11-13 I. S. W. B. Prasetya