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Time-Resolved Spectroscopy (TRS) is a powerful modality for non-invasive characterization of turbid media. However, extracting optical properties, absorption $\mu_a$ and reduced scattering $\mu_s'$, from 3D stochastic measurements remains…

Numerical Analysis · Mathematics 2026-04-14 Joubine Aghili , Rémi Imbach , Anne Pallarès , Philippe Schmitt , Wilfried Uhring

The structure of proteins is essential for its function. The determination of protein structures is possible by experimental or predicted by computational methods, but also a combination of both approaches is possible. Here, first an…

Other Quantitative Biology · Quantitative Biology 2020-03-03 Gerhard Mayer

Spatial Transcriptomics (ST) reveals the spatial distribution of gene expression in tissues, offering critical insights into biological processes and disease mechanisms. However, the high cost, limited coverage, and technical complexity of…

Computer Vision and Pattern Recognition · Computer Science 2025-04-22 Yi Niu , Jiashuai Liu , Yingkang Zhan , Jiangbo Shi , Di Zhang , Marika Reinius , Ines Machado , Mireia Crispin-Ortuzar , Jialun Wu , Chen Li , Zeyu Gao

Molecular dynamics (MD) has served as a powerful tool for designing materials with reduced reliance on laboratory testing. However, the use of MD directly to treat the deformation and failure of materials at the mesoscale is still largely…

Materials Science · Physics 2023-01-12 Huaiqian You , Xiao Xu , Yue Yu , Stewart Silling , Marta D'Elia , John Foster

Knowledge of a protein's atomic conformational ensemble is critical to determining its function, yet state-of-the-art ensemble prediction models are limited by lack of high-quality conformational data from simulation or experiment. Recent…

Machine Learning · Computer Science 2026-05-12 Jay Shenoy , Miro Astore , Axel Levy , Frédéric Poitevin , Sonya M. Hanson , Gordon Wetzstein

Zero-shot skeleton action recognition is a non-trivial task that requires robust unseen generalization with prior knowledge from only seen classes and shared semantics. Existing methods typically build the skeleton-semantics interactions by…

Computer Vision and Pattern Recognition · Computer Science 2024-11-27 Yang Chen , Jingcai Guo , Song Guo , Dacheng Tao

Motivation: Proteins are of great significance in living organisms. However, understanding their functions encounters numerous challenges, such as insufficient integration of multimodal information, a large number of training parameters,…

Machine Learning · Computer Science 2025-05-23 Zhicong Wang , Zicheng Ma , Ziqiang Cao , Changlong Zhou , Jun Zhang , Yiqin Gao

Most solved dynamic structural macrofinance models are non-linear and/or non-Gaussian state-space models with high-dimensional and complex structures. We propose an annealed controlled sequential Monte Carlo method that delivers numerically…

Computation · Statistics 2022-01-05 Andras Fulop , Jeremy Heng , Junye Li

Modern stereo matching methods have leveraged monocular depth foundation models to achieve superior zero-shot generalization performance. However, most existing methods primarily focus on extracting robust features for cost volume…

Computer Vision and Pattern Recognition · Computer Science 2026-03-04 Xianqi Wang , Hao Yang , Hangtian Wang , Junda Cheng , Gangwei Xu , Min Lin , Xin Yang

Protein structure tokenizers (PSTs) are workhorses in protein language modeling, function prediction, and evolutionary analysis. However, existing PSTs only capture local geometry of static structures, and miss the correlated motions and…

Machine Learning · Computer Science 2026-05-15 Kaiwen Shi , Carlos Oliver

Diffusion models generate samples by denoising along the score of a perturbed target distribution. In practice, one trains a neural diffusion model, which is computationally expensive. Recent work suggests that score matching implicitly…

Machine Learning · Statistics 2026-05-15 Zhenyu Yao , Daniel Paulin

Signal recognition is one of significant and challenging tasks in the signal processing and communications field. It is often a common situation that there's no training data accessible for some signal classes to perform a recognition task.…

Machine Learning · Computer Science 2021-05-12 Yihong Dong , Xiaohan Jiang , Huaji Zhou , Yun Lin , Qingjiang Shi

Adapting to dynamic data distributions is a practical yet challenging task. One effective strategy is to use a model ensemble, which leverages the diverse expertise of different models to transfer knowledge to evolving data distributions.…

Credit risk default prediction remains a cornerstone of risk management in the financial industry. The task involves estimating the likelihood that a borrower will fail to meet debt obligations, an objective critical for lending decisions,…

Machine Learning · Computer Science 2026-04-21 Swattik Maiti , Ritik Pratap Singh , Fardina Fathmiul Alam

The accurate prediction of protein-RNA binding affinity remains an unsolved problem in structural biology, limiting opportunities in understanding gene regulation and designing RNA-targeting therapeutics. A central obstacle is the…

Knowing a biomolecule's structure is inherently linked to and a prerequisite for any detailed understanding of its function. Significant effort has gone into developing technologies for structural characterization. These technologies do not…

Data Structures and Algorithms · Computer Science 2017-06-22 Michael Wegner , Oskar Taubert , Alexander Schug , Henning Meyerhenke

Spatio-temporal forecasting is fundamental to intelligent systems in transportation, climate science, and urban planning. However, training deep learning models on the massive, often redundant, datasets from these domains presents a…

Machine Learning · Computer Science 2026-03-03 Wei Chen , Junle Chen , Yuqian Wu , Yuxuan Liang , Xiaofang Zhou

In this paper, we tackle the task of musical stem retrieval. Given a musical mix, it consists in retrieving a stem that would fit with it, i.e., that would sound pleasant if played together. To do so, we introduce a new method based on…

Sound · Computer Science 2025-02-25 Alain Riou , Antonin Gagneré , Gaëtan Hadjeres , Stefan Lattner , Geoffroy Peeters

Many data are naturally modeled by an unobserved hierarchical structure. In this paper we propose a flexible nonparametric prior over unknown data hierarchies. The approach uses nested stick-breaking processes to allow for trees of…

Methodology · Statistics 2010-06-08 Ryan Prescott Adams , Zoubin Ghahramani , Michael I. Jordan

Zero-shot learning, which aims to recognize new categories that are not included in the training set, has gained popularity owing to its potential ability in the real-word applications. Zero-shot learning models rely on learning an…

Computer Vision and Pattern Recognition · Computer Science 2025-10-22 Xinsheng Wang , Shanmin Pang , Jihua Zhu , Zhongyu Li , Zhiqiang Tian , Yaochen Li
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