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Analysis of sleep for the diagnosis of sleep disorders such as Type-1 Narcolepsy (T1N) currently requires visual inspection of polysomnography records by trained scoring technicians. Here, we used neural networks in approximately 3,000…

Topological Data Analysis (TDA) has recently gained significant attention in the field of financial prediction. However, the choice of point cloud construction methods, topological feature representations, and classification models has a…

Machine Learning · Computer Science 2024-11-22 Dazhi Huang , Pengcheng Xu , Xiaocheng Huang , Jiayi Chen

In this study, the development of an automatic algorithm is presented to classify the nocturnal audio recording of an obstructive sleep apnoea (OSA) patient as OSA related snore, simple snore and other sounds. Recent studies has been shown…

Audio and Speech Processing · Electrical Eng. & Systems 2021-03-03 Arun Sebastian , Peter A. Cistulli , Gary Cohen , Philip de Chazal

Electroencephalogram (EEG) is a common base signal used to monitor brain activity and diagnose sleep disorders. Manual sleep stage scoring is a time-consuming task for sleep experts and is limited by inter-rater reliability. In this paper,…

Signal Processing · Electrical Eng. & Systems 2019-06-19 Sajad Mousavi , Fatemeh Afghah , U. Rajendra Acharya

Microscopic examination of slides prepared from tissue samples is the primary tool for detecting and classifying cancerous lesions, a process that is time-consuming and requires the expertise of experienced pathologists. Recent advances in…

Computer Vision and Pattern Recognition · Computer Science 2024-10-15 Saba Fatema , Brighton Nuwagira , Sayoni Chakraborty , Reyhan Gedik , Baris Coskunuzer

Interacting, self-propelled particles such as epithelial cells can dynamically self-organize into complex multicellular patterns, which are challenging to classify without a priori information. Classically, different phases and phase…

Quantitative Methods · Quantitative Biology 2021-01-19 Dhananjay Bhaskar , William Y. Zhang , Ian Y. Wong

We propose a novel unsupervised approach for sleep dynamics exploration and automatic annotation by combining modern harmonic analysis tools. Specifically, we apply diffusion-based algorithms, diffusion map (DM) and alternating diffusion…

Signal Processing · Electrical Eng. & Systems 2019-05-14 Gi-Ren Liu , Yu-Lun Lo , Yuan-Chung Sheu , Hau-Tieng Wu

Sleep is vital for people's physical and mental health, and sound sleep can help them focus on daily activities. Therefore, a sleep study that includes sleep patterns and sleep disorders is crucial to enhancing our knowledge about…

Machine Learning · Computer Science 2025-04-18 Tayab Uddin Wara , Ababil Hossain Fahad , Adri Shankar Das , Md. Mehedi Hasan Shawon

Topological data analysis (TDA) is a relatively new field that is gaining rapid adoption due to its robustness and ability to effectively describe complex datasets by quantifying geometric information. In imaging contexts, TDA typically…

Computer Vision and Pattern Recognition · Computer Science 2025-07-15 Aaryam Sharma

In this paper, we develop topological data analysis methods for classification tasks on univariate time series. As an application, we perform binary and ternary classification tasks on two public datasets that consist of physiological…

Machine Learning · Statistics 2021-06-15 Alperen Karan , Atabey Kaygun

Topological data analysis (TDA) approaches are becoming increasingly popular for studying the dependence patterns in multivariate time series data. In particular, various dependence patterns in brain networks may be linked to specific tasks…

Methodology · Statistics 2025-12-08 Anass El Yaagoubi Bourakna , Moo K. Chung , Hernando Ombao

Topological Data Analysis (TDA) gives practioners the ability to analyse the global structure of cybersecurity data. We use TDA for anomaly detection in host-based logs collected with the open-source Logging Made Easy (LME) project. We…

Machine Learning · Computer Science 2022-04-28 Thomas Davies

Topological data analysis (TDA) is a tool from data science and mathematics that is beginning to make waves in environmental science. In this work, we seek to provide an intuitive and understandable introduction to a tool from TDA that is…

Machine Learning · Computer Science 2025-07-15 Lander Ver Hoef , Henry Adams , Emily J. King , Imme Ebert-Uphoff

Study Objective: Sleep is reflected not only in the electroencephalogram but also in heart rhythms and breathing patterns. Therefore, we hypothesize that it is possible to accurately stage sleep based on the electrocardiogram (ECG) and…

We introduce an innovative, data-driven topological data analysis (TDA) technique for estimating the state spaces of dynamically changing functional human brain networks at rest. Our method utilizes the Wasserstein distance to measure…

Algebraic Topology · Mathematics 2024-04-18 Moo K. Chung , Shih-Gu Huang , Ian C. Carroll , Vince D. Calhoun , H. Hill Goldsmith

This paper proposes a novel framework for automatically capturing the time-frequency nature of electroencephalogram (EEG) signals of human sleep based on the authoritative sleep medicine guidance. The framework consists of two parts: the…

Machine Learning · Computer Science 2023-01-13 Zheng Chen , Ziwei Yang , Lingwei Zhu , Wei Chen , Toshiyo Tamura , Naoaki Ono , MD Altaf-Ul-Amin , Shigehiko Kanaya , Ming Huang

We used convolutional neural networks (CNNs) for automatic sleep stage scoring based on single-channel electroencephalography (EEG) to learn task-specific filters for classification without using prior domain knowledge. We used an openly…

Machine Learning · Statistics 2016-10-07 Orestis Tsinalis , Paul M. Matthews , Yike Guo , Stefanos Zafeiriou

One of the most important problems arising in time series analysis is that of bifurcation, or change point detection. That is, given a collection of time series over a varying parameter, when has the structure of the underlying dynamical…

Machine Learning · Statistics 2023-03-15 Audun Myers , Firas A. Khasawneh , Elizabeth Munch

Modern sleep monitoring development is shifting towards the use of unobtrusive sensors combined with algorithms for automatic sleep scoring. Many different combinations of wet and dry electrodes, ear-centered, forehead-mounted or…

Quantitative Methods · Quantitative Biology 2021-04-14 Kaare B. Mikkelsen , Huy Phan , Mike L. Rank , Martin C. Hemmsen , Maarten de Vos , Preben Kidmose

Sleep is among the most important factors affecting one's daily performance, well-being, and life quality. Nevertheless, it became possible to measure it in daily life in an unobtrusive manner with wearable devices. Rather than camera…

Signal Processing · Electrical Eng. & Systems 2023-03-13 Ozan Kılıç , Berrenur Saylam , Özlem Durmaz İncel