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Topological data analysis (TDA) is an emerging technique for biological signal processing. TDA leverages the invariant topological features of signals in a metric space for robust analysis of signals even in the presence of noise. In this…

Algebraic Topology · Mathematics 2024-01-11 Shashank Manjunath , Jose A. Perea , Aarti Sathyanarayana

Topological Data Analysis (TDA) has been successfully used for various tasks in signal/image processing, from visualization to supervised/unsupervised classification. Often, topological characteristics are obtained from persistent homology…

Sound · Computer Science 2023-10-11 Guillem Bonafos , Jean-Marc Freyermuth , Pierre Pudlo , Samuel Tronçon , Arnaud Rey

We introduce a very general approach to the analysis of signals from their noisy measurements from the perspective of Topological Data Analysis (TDA). While TDA has emerged as a powerful analytical tool for data with pronounced topological…

Signal Processing · Electrical Eng. & Systems 2025-07-29 Juan Manuel Miramont , Kin Aun Tan , Soumendu Sundar Mukherjee , Rémi Bardenet , Subhroshekhar Ghosh

We present an investigation of how topological data analysis (TDA) can be applied to condition-based monitoring (CBM) of wind turbines for energy generation. TDA is a branch of data analysis focusing on extracting meaningful information…

Systems and Control · Electrical Eng. & Systems 2024-06-25 Simone Casolo , Alexander Stasik , Zhenyou Zhang , Signe Riemer-Sorensen

We develop a framework for analyzing multivariate time series using topological data analysis (TDA) methods. The proposed methodology involves converting the multivariate time series to point cloud data, calculating Wasserstein distances…

Algebraic Topology · Mathematics 2020-12-29 Chengyuan Wu , Carol Anne Hargreaves

We apply topological data analysis (TDA) to speech classification problems and to the introspection of a pretrained speech model, HuBERT. To this end, we introduce a number of topological and algebraic features derived from Transformer…

Topological Data Analysis (TDA) is an emergent field that aims to discover topological information hidden in a dataset. TDA tools have been commonly used to create filters and topological descriptors to improve Machine Learning (ML)…

Machine Learning · Computer Science 2022-02-07 Rolando Kindelan , José Frías , Mauricio Cerda , Nancy Hitschfeld

Sleep disorder is one of many neurological diseases that can affect greatly the quality of daily life. It is very burdensome to manually classify the sleep stages to detect sleep disorders. Therefore, the automatic sleep stage…

Neurons and Cognition · Quantitative Biology 2020-05-13 Hyeong-Jin Kim , Minji Lee , Seong-Whan Lee

Artificial Neural Networks (ANNs) require significant amounts of data and computational resources to achieve high effectiveness in performing the tasks for which they are trained. To reduce resource demands, various techniques, such as…

Neural and Evolutionary Computing · Computer Science 2024-12-04 A. Stolarek , W. Jaworek

Machine learning models for repeated measurements are limited. Using topological data analysis (TDA), we present a classifier for repeated measurements which samples from the data space and builds a network graph based on the data topology.…

Machine Learning · Computer Science 2019-04-08 Henri Riihimäki , Wojciech Chachólski , Jakob Theorell , Jan Hillert , Ryan Ramanujam

In this article, we introduce a Topological Data Analysis (TDA) pipeline for neural spike train data. Understanding how the brain transforms sensory information into perception and behavior requires analyzing coordinated neural population…

Methodology · Statistics 2025-12-10 Cagatay Ayhan , Audrey N. Nash , Roberto Vincis , Martin Bauer , Richard Bertram , Tom Needham

This paper proposes a new approach to identifying patients with insomnia using a single EEG channel, without the need for sleep stage annotation. Data preprocessing, feature extraction, feature selection, and classification techniques are…

Computer Vision and Pattern Recognition · Computer Science 2024-12-16 Chan-Yun Yang , Nilantha Premakumara , Hooman Samani , Chinthaka Premachandra

Topological Data Analysis (TDA) allows us to extract powerful topological and higher-order information on the global shape of a data set or point cloud. Tools like Persistent Homology or the Euler Transform give a single complex description…

Algebraic Topology · Mathematics 2025-11-04 Vincent P. Grande , Michael T. Schaub

Patients with sleep disorders can better manage their lifestyle if they know about their special situations. Detection of such sleep disorders is usually possible by analyzing a number of vital signals that have been collected from the…

Signal Processing · Electrical Eng. & Systems 2020-04-14 Mohamadreza Jafaryani , Saeed Khorram , Vahid Pourahmadi , Minoo Shahbazi

Pulmonary Embolism (PE) is a common and potentially lethal condition. Most patients die within the first few hours from the event. Despite diagnostic advances, delays and underdiagnosis in PE are common.To increase the diagnostic…

Topological Data Analysis (TDA) is an emergent field that aims to discover topological information hidden in a dataset. TDA tools have been commonly used to create filters and topological descriptors to improve Machine Learning (ML)…

Machine Learning · Computer Science 2021-02-09 Rolando Kindelan , José Frías , Mauricio Cerda , Nancy Hitschfeld

Sleep is an essential component of human physiology, contributing significantly to overall health and quality of life. Accurate sleep staging and disorder detection are crucial for assessing sleep quality. Studies in the literature have…

Signal Processing · Electrical Eng. & Systems 2025-02-26 Kianoosh Kazemi , Iman Azimi , Michelle Khine , Rami N. Khayat , Amir M. Rahmani , Pasi Liljeberg

Sleep is crucial for human health, and EEG signals play a significant role in sleep research. Due to the high-dimensional nature of EEG signal data sequences, data visualization and clustering of different sleep stages have been challenges.…

Machine Learning · Computer Science 2024-09-04 Yangfan Deng , Hamad Albidah , Ahmed Dallal , Jijun Yin , Zhi-Hong Mao

In recent years, the preliminary diagnosis of ADHD using EEG has attracted the attention from researchers. EEG, known for its expediency and efficiency, plays a pivotal role in the diagnosis and treatment of ADHD. However, the…

Machine Learning · Computer Science 2024-11-06 Tianming Cai , Guoying Zhao , Junbin Zang , Chen Zong , Zhidong Zhang , Chenyang Xue

Topological Data Analysis (TDA) is the collection of mathematical tools that capture the structure of shapes in data. Despite computational topology and computational geometry, the utilization of TDA in time series and signal processing is…

Information Retrieval · Computer Science 2018-10-23 Shafie Gholizadeh , Wlodek Zadrozny
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