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Graph similarity computation aims to predict a similarity score between one pair of graphs to facilitate downstream applications, such as finding the most similar chemical compounds similar to a query compound or Fewshot 3D Action…

Machine Learning · Computer Science 2021-01-06 Haoyan Xu , Ziheng Duan , Jie Feng , Runjian Chen , Qianru Zhang , Zhongbin Xu , Yueyang Wang

Suppose that $G$ is a connected simple graph with the vertex set $V( G ) = \{ v_1,v_2,\cdots ,v_n \} $. Let $d( v_i,v_j ) $ be the distance between $v_i$ and $v_j$. Then the distance matrix of $G$ is $D( G ) =( d_{ij} )_{n\times n}$, where…

Combinatorics · Mathematics 2020-11-04 Xu Chen , Guoping Wang

Given a graph $G$ then a subgraph $H$ is $isometric$ if, for every pair of vertices $u,v$ of $H$, we have $d_H(u,v) = d_G(u,v)$. We say a graph $G$ is $distance\ preserving\ (dp)$ if it has an isometric subgraph of every possible order up…

Combinatorics · Mathematics 2015-07-15 Emad Zahedi

The neighbourhood matrix, $\mathcal{NM}(G)$, a novel representation of graphs proposed in \cite {ALPaper} is defined using the neighbourhood sets of the vertices. The matrix also exhibits a bijection between the product of two well-known…

Data Structures and Algorithms · Computer Science 2020-02-12 Sivakumar Karunakaran , Lavanya Selvaganesh

Cross-domain alignment between two sets of entities (e.g., objects in an image, words in a sentence) is fundamental to both computer vision and natural language processing. Existing methods mainly focus on designing advanced attention…

Computation and Language · Computer Science 2020-07-28 Liqun Chen , Zhe Gan , Yu Cheng , Linjie Li , Lawrence Carin , Jingjing Liu

The famous Erd\H{o}s distinct distances problem asks the following: how many distinct distances must exist between a set of $n$ points in the plane? There are many generalisations of this question that ask one to consider different spaces…

Combinatorics · Mathematics 2025-05-13 Sean Dewar , Nora Frankl , Samuel Mansfield , Anthony Nixon , Jonathan Passant , Audie Warren

Word Mover's Distance (WMD) computes the distance between words and models text similarity with the moving cost between words in two text sequences. Yet, it does not offer good performance in sentence similarity evaluation since it does not…

Computation and Language · Computer Science 2022-06-22 Chengwei Wei , Bin Wang , C. -C. Jay Kuo

Graph Edit Distance (GED) is a fundamental graph similarity metric widely used in various applications. However, computing GED is an NP-hard problem. Recent state-of-the-art hybrid GED solver has shown promising performance by formulating…

Machine Learning · Computer Science 2025-10-14 Wei Huang , Hanchen Wang , Dong Wen , Shaozhen Ma , Wenjie Zhang , Xuemin Lin

Trajectory optimization (TO) aims to find a sequence of valid states while minimizing costs. However, its fine validation process is often costly due to computationally expensive collision searches, otherwise coarse searches lower the…

Robotics · Computer Science 2023-09-07 Yeseung Kim , Jinwoo Kim , Daehyung Park

Traditional graph centrality measures effectively quantify node importance but fail to capture the structural uniqueness of multi-scale connectivity patterns -- critical for understanding network resilience and function. This paper…

Social and Information Networks · Computer Science 2025-11-03 R. Scott Johnson

Graph Neural Networks (GNNs) have emerged as a prominent research topic in the field of machine learning. Existing GNN models are commonly categorized into two types: spectral GNNs, which are designed based on polynomial graph filters, and…

Machine Learning · Computer Science 2023-09-01 Guanyu Cui , Zhewei Wei

Let G be a simple, connected graph on n vertices. Let d_G(u,v) denote the distance between vertices u and v in G. A subgraph H of G is isometric if d_H(u,v)=d_G(u,v) for every u,v in V(H). We say that G is a distance-preserving graph if G…

Combinatorics · Mathematics 2014-05-08 Abdol-Hossein Esfahanian , Ronald Nussbaum , Dennis Ross , Bruce E. Sagan

A wide range of models have been proposed for Graph Generative Models, necessitating effective methods to evaluate their quality. So far, most techniques use either traditional metrics based on subgraph counting, or the representations of…

Machine Learning · Statistics 2022-06-14 Hamed Shirzad , Kaveh Hassani , Danica J. Sutherland

A vertex set $U \subseteq V$ of an undirected graph $G=(V,E)$ is a $\textit{resolving set}$ for $G$, if for every two distinct vertices $u,v \in V$ there is a vertex $w \in U$ such that the distances between $u$ and $w$ and the distance…

Computational Complexity · Computer Science 2018-06-28 Duygu Vietz , Stefan Hoffmann , Egon Wanke

A new class of distances for graph vertices is proposed. This class contains parametric families of distances which reduce to the shortest-path, weighted shortest-path, and the resistance distances at the limiting values of the family…

Combinatorics · Mathematics 2011-01-25 Pavel Chebotarev

Notions of graph similarity provide alternative perspective on the graph isomorphism problem and vice-versa. In this paper, we consider measures of similarity arising from mismatch norms as studied in Gervens and Grohe: the edit distance…

Discrete Mathematics · Computer Science 2026-05-07 He Sun , Danny Vagnozzi

To quantify the fundamental evolution of time-varying networks, and detect abnormal behavior, one needs a notion of temporal difference that captures significant organizational changes between two successive instants. In this work, we…

Social and Information Networks · Computer Science 2017-08-17 Nathan D Monnig , Francois G Meyer

A random geometric graph $G_n$ is given by picking $n$ vertices in $\mathbb{R}^d$ independently under a common bounded probability distribution, with two vertices adjacent if and only if their $l^p$-distance is at most $r_n$. We investigate…

Combinatorics · Mathematics 2009-09-22 Yilun Shang

Graph neural networks (GNNs) have emerged as a powerful model to capture critical graph patterns. Instead of treating them as black boxes in an end-to-end fashion, attempts are arising to explain the model behavior. Existing works mainly…

Machine Learning · Computer Science 2024-02-22 Yi Nian , Yurui Chang , Wei Jin , Lu Lin

Readability criteria, such as distance or neighborhood preservation, are often used to optimize node-link representations of graphs to enable the comprehension of the underlying data. With few exceptions, graph drawing algorithms typically…

Data Structures and Algorithms · Computer Science 2020-08-14 Reyan Ahmed , Felice De Luca , Sabin Devkota , Stephen Kobourov , Mingwei Li
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