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While deep networks have achieved broad success in analyzing natural images, when applied to medical scans, they often fail in unexcepted situations. We investigate this challenge and focus on model sensitivity to domain shifts, such as…

Computer Vision and Pattern Recognition · Computer Science 2024-11-05 Yue Yang , Mona Gandhi , Yufei Wang , Yifan Wu , Michael S. Yao , Chris Callison-Burch , James C. Gee , Mark Yatskar

The introduction of Large Language Models (LLMs), and the vast volume of publicly available medical data, amplified the application of NLP to the medical domain. However, LLMs are pretrained on data that are not explicitly relevant to the…

Computation and Language · Computer Science 2023-12-12 Chris Solomou

Medication recommendation is a vital task for improving patient care and reducing adverse events. However, existing methods often fail to capture the complex and dynamic relationships among patient medical records, drug efficacy and safety,…

Artificial Intelligence · Computer Science 2023-12-15 Minh-Van Nguyen , Duy-Thinh Nguyen , Quoc-Huy Trinh , Bac-Hoai Le

Objective: Electronic medical records (EMRs) contain an amount of medical knowledge which can be used for clinical decision support (CDS). Our objective is a general system that can extract and represent these knowledge contained in EMRs to…

Artificial Intelligence · Computer Science 2017-09-21 Chao Zhao , Jingchi Jiang , Yi Guan

Deep Learning (DL) models proved themselves to perform extremely well on a wide variety of learning tasks, as they can learn useful patterns from large data sets. However, purely data-driven models might struggle when very difficult…

Machine Learning · Computer Science 2020-05-22 Andrea Borghesi , Federico Baldo , Michela Milano

Medication recommendation targets to provide a proper set of medicines according to patients' diagnoses, which is a critical task in clinics. Currently, the recommendation is manually conducted by doctors. However, for complicated cases,…

Machine Learning · Computer Science 2022-02-21 Rui Wu , Zhaopeng Qiu , Jiacheng Jiang , Guilin Qi , Xian Wu

Recently, biomedical version of embeddings obtained from language models such as BioELMo have shown state-of-the-art results for the textual inference task in the medical domain. In this paper, we explore how to incorporate structured…

Computation and Language · Computer Science 2021-09-07 Soumya Sharma , Bishal Santra , Abhik Jana , T. Y. S. S. Santosh , Niloy Ganguly , Pawan Goyal

Doctors typically write in incomprehensible handwriting, making it difficult for both the general public and some pharmacists to understand the medications they have prescribed. It is not ideal for them to write the prescription quietly and…

Computer Vision and Pattern Recognition · Computer Science 2022-10-24 Pavithiran G , Sharan Padmanabhan , Nuvvuru Divya , Aswathy V , Irene Jerusha P , Chandar B

In this work, we consider the medical concept normalization problem, i.e., the problem of mapping a health-related entity mention in a free-form text to a concept in a controlled vocabulary, usually to the standard thesaurus in the Unified…

Computation and Language · Computer Science 2023-11-21 Zulfat Miftahutdinov , Elena Tutubalina

Off-the-shelf biomedical embeddings obtained from the recently released various pre-trained language models (such as BERT, XLNET) have demonstrated state-of-the-art results (in terms of accuracy) for the various natural language…

Computation and Language · Computer Science 2020-12-22 Ishani Mondal

Many patients with chronic diseases resort to multiple medications to relieve various symptoms, which raises concerns about the safety of multiple medication use, as severe drug-drug antagonism can lead to serious adverse effects or even…

Machine Learning · Computer Science 2023-03-07 Tian Bian , Yuli Jiang , Jia Li , Tingyang Xu , Yu Rong , Yi Su , Timothy Kwok , Helen Meng , Hong Cheng

Deep learning models exhibit limited generalizability across different domains. Specifically, transferring knowledge from available entangled domain features(source/target domain) and categorical features to new unseen categorical features…

Computer Vision and Pattern Recognition · Computer Science 2020-03-03 Qingjie Meng , Daniel Rueckert , Bernhard Kainz

Combinatorial medication recommendation(CMR) is a fundamental task of healthcare, which offers opportunities for clinical physicians to provide more precise prescriptions for patients with intricate health conditions, particularly in the…

Artificial Intelligence · Computer Science 2025-01-14 Jie Tan , Yu Rong , Kangfei Zhao , Tian Bian , Tingyang Xu , Junzhou Huang , Hong Cheng , Helen Meng

Domain-specific instruction-tuning has become the defacto standard for improving the performance of large language models (LLMs) in specialized applications, e.g., medical question answering. Since the instruction-tuning dataset might…

Computation and Language · Computer Science 2025-05-29 Qihuang Zhong , Liang Ding , Fei Liao , Juhua Liu , Bo Du , Dacheng Tao

Although explainability is essential in the clinical diagnosis, most deep learning models still function as black boxes without elucidating their decision-making process. In this study, we investigate the explainable model development that…

Computer Vision and Pattern Recognition · Computer Science 2024-09-20 Yunhe Gao , Difei Gu , Mu Zhou , Dimitris Metaxas

Predicting discharge medications right after a patient being admitted is an important clinical decision, which provides physicians with guidance on what type of medication regimen to plan for and what possible changes on initial medication…

Computation and Language · Computer Science 2017-12-06 Yuan Yang , Pengtao Xie , Xin Gao , Carol Cheng , Christy Li , Hongbao Zhang , Eric Xing

Online news recommender systems aim to address the information explosion of news and make personalized recommendation for users. In general, news language is highly condensed, full of knowledge entities and common sense. However, existing…

Machine Learning · Statistics 2018-01-31 Hongwei Wang , Fuzheng Zhang , Xing Xie , Minyi Guo

Machine Learning (ML) models are very effective in many learning tasks, due to the capability to extract meaningful information from large data sets. Nevertheless, there are learning problems that cannot be easily solved relying on pure…

Machine Learning · Computer Science 2021-01-29 Andrea Borghesi , Federico Baldo , Michele Lombardi , Michela Milano

We present a survey of ways in which existing scientific knowledge are included when constructing models with neural networks. The inclusion of domain-knowledge is of special interest not just to constructing scientific assistants, but…

Machine Learning · Computer Science 2022-01-25 Tirtharaj Dash , Sharad Chitlangia , Aditya Ahuja , Ashwin Srinivasan

Deep learning (DL) has remarkably impacted several different scientific disciplines over the last few years. E.g., in image processing and analysis, DL algorithms were able to outperform other cutting-edge methods. Additionally, DL has…

Image and Video Processing · Electrical Eng. & Systems 2022-05-19 Jan Egger , Christina Gsaxner , Antonio Pepe , Kelsey L. Pomykala , Frederic Jonske , Manuel Kurz , Jianning Li , Jens Kleesiek