Related papers: Clustering and Arnoux-Rauzy words
A word $w_1w_2\cdots w_n$ is said to be up-down if $w_1 < w_2 >w_3 \cdots$. Carlitz and Scoville found the generating function for the number of up-down words over an alphabet of size $k$. Using properties of the Chebyshev polynomials we…
We exhibit the construction of a deterministic automaton that, given k > 0, recognizes the (regular) language of k-differentiable words. Our approach follows a scheme of Crochemore et al. based on minimal forbidden words. We extend this…
The notion of Wheeler languages is rooted in the Burrows-Wheeler transform (BWT), one of the most central concepts in data compression and indexing. The BWT has been generalized to finite automata, the so-called Wheeler automata, by Gagie…
A non-empty word $w$ is a border of the word $u$ if $\vert w\vert<\vert u\vert$ and $w$ is both a prefix and a suffix of $u$. A word $u$ with the border $w$ is closed if $u$ has exactly two occurrences of $w$. A word $u$ is privileged if…
We study the $k$-Bonacci word over the infinite alphabet $\mathbb{N}$. Since the alphabet is infinite, the usual factor complexity is infinite and does not provide any information. We therefore investigate factor occurrence statistics in…
We construct geometric realization for non-exceptional mutation-finite cluster algebras by extending the theory of Fomin and Thurston to skew-symmetrizable case. Cluster variables for these algebras are renormalized lambda lengths on…
Clustering is a fundamental tool that has garnered significant interest across a wide range of applications including text analysis. To improve clustering accuracy, many researchers have incorporated background knowledge, typically in the…
A problem of reconstructing words from their subwords involves determining the minimum amount of information needed, such as multisets of scattered subwords of a specific length or the frequency of scattered subwords from a given set, in…
We investigate the scattered palindromic subwords in a finite word. We start by characterizing the words with the least number of scattered palindromic subwords. Then, we give an upper bound for the total number of palindromic subwords in a…
This paper provides an upper bound for several subsets of maximal repeats and maximal pairs in compressed strings and also presents a formerly unknown relationship between maximal pairs and the run-length Burrows-Wheeler transform. This…
Usual formulations of the clustering coefficient can be shown to be insufficient in the task of describing the local topology of very simple networks. Motivated by this, we review some alternatives in order to present an extension, the…
Given a countable set X (usually taken to be N or Z), an infinite permutation $\pi$ of X is a linear ordering $<_\pi$ of X. This paper investigates the combinatorial complexity of infinite permutations on N associated with the image of…
In this paper we explore a new hierarchy of classes of languages and infinite words and its connection with complexity classes. Namely, we say that a language belongs to the class $L_k$ if it is a subset of the catenation of $k$ languages…
Dictionaries are inherently circular in nature. A given word is linked to a set of alternative words (the definition) which in turn point to further descendants. Iterating through definitions in this way, one typically finds that…
Mode clustering is a nonparametric method for clustering that defines clusters using the basins of attraction of a density estimator's modes. We provide several enhancements to mode clustering: (i) a soft variant of cluster assignment, (ii)…
Minimal forbidden factors are a useful tool for investigating properties of words and languages. Two factorial languages are distinct if and only if they have different (antifactorial) sets of minimal forbidden factors. There exist…
We consider the following novel variation on a classical avoidance problem from combinatorics on words: instead of avoiding repetitions in all factors of a word, we avoid repetitions in all factors where each individual factor is considered…
We show that the objective function of conventional k-means clustering can be expressed as the Frobenius norm of the difference of a data matrix and a low rank approximation of that data matrix. In short, we show that k-means clustering is…
A position $p$ in a word $w$ is critical if the minimal local period at $p$ is equal to the global period of $w$. According to the Critical Factorisation Theorem all words of length at least two have a critical point. We study the number…
We study word reconstruction problems. Improving a previous result by P. Fleischmann, M. Lejeune, F. Manea, D. Nowotka and M. Rigo, we prove that, for any unknown word $w$ of length $n$ over an alphabet of cardinality $k$, $w$ can be…