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Predictive systems, in particular machine learning algorithms, can take important, and sometimes legally binding, decisions about our everyday life. In most cases, however, these systems and decisions are neither regulated nor certified.…

Machine Learning · Computer Science 2022-09-09 Kacper Sokol , Alexander Hepburn , Rafael Poyiadzi , Matthew Clifford , Raul Santos-Rodriguez , Peter Flach

We present Glyph - a Python package for genetic programming based symbolic regression. Glyph is designed for usage let by numerical simulations let by real world experiments. For experimentalists, glyph-remote provides a separation of…

Mathematical Software · Computer Science 2018-03-22 Markus Quade , Julien Gout , Markus Abel

Python is very popular because it can be used for a wider audience of developers, data scientists, machine learning experts and so on. Like other programming languages, there are beginner to advanced levels of writing Python code. However,…

Software Engineering · Computer Science 2024-10-11 Indira Febriyanti , Youmei Fan , Kazumasa Shimari , Kenichi Matsumoto , Raula Gaikovina Kula

The data collected from open source projects provide means to model large software ecosystems, but often suffer from data quality issues, specifically, multiple author identification strings in code commits might actually be associated with…

Software Engineering · Computer Science 2020-03-31 Tanner Fry , Tapajit Dey , Andrey Karnauch , Audris Mockus

Context: Software systems are in continuous evolution through source code changes to fixing bugs, adding new functionalities and improving the internal architecture. All these practices are recorded in the version history, which can be…

Software Engineering · Computer Science 2020-01-17 Leandro Ungari Cayres , Bruno Santos de Lima , Rogério Eduardo Garcia

Software Bills of Material (SBOMs), which improve transparency by listing the components constituting software, are a key countermeasure to the mounting problem of Software Supply Chain attacks. SBOM generation tools take project source…

Cryptography and Security · Computer Science 2024-09-04 Serena Cofano , Giacomo Benedetti , Matteo Dell'Amico

Recently, dynamically typed languages, such as Python, have gained unprecedented popularity. Although these languages alleviate the need for mandatory type annotations, types still play a critical role in program understanding and…

Programming Languages · Computer Science 2022-02-08 Ibrahim Abdelaziz , Julian Dolby , Kavitha Srinivas

Modern open source software development heavily relies on the issue tracking systems to manage their feature requests, bug reports, tasks, and other similar artifacts. Together, those "issues" form a complex network with links to each…

Software Engineering · Computer Science 2021-08-11 Alexander Nicholson , Jin L. C. Guo

Industrial applications heavily rely on open-source software (OSS) libraries, which provide various benefits. But, they can also present a substantial risk if a vulnerability or attack arises and the community fails to promptly address the…

Software Engineering · Computer Science 2025-04-24 Alexandros Tsakpinis , Alexander Pretschner

In software development, it is common for programmers to copy-paste or port code snippets and then adapt them to their use case. This scenario motivates the code adaptation task -- a variant of program repair which aims to adapt variable…

Software Engineering · Computer Science 2023-10-09 Xiaoyu Liu , Jinu Jang , Neel Sundaresan , Miltiadis Allamanis , Alexey Svyatkovskiy

A recent study showed that more than 70% of researchers fail to reproduce their peers's experiments and more than half fail to reproduce their own experiments. Obviously, from a perspective of scientific quality this is a more than…

Human-Computer Interaction · Computer Science 2021-03-18 Andrew Tristan , Vinicius Woloszyn , Ben Kaden

We introduce a large-scale dataset of the complete texts of free/open source software (FOSS) license variants. To assemble it we have collected from the Software Heritage archive-the largest publicly available archive of FOSS source code…

Software Engineering · Computer Science 2022-04-04 Stefano Zacchiroli

PyPOTS is an open-source Python library dedicated to data mining and analysis on multivariate partially-observed time series with missing values. Particularly, it provides easy access to diverse algorithms categorized into five tasks:…

Machine Learning · Computer Science 2025-07-10 Wenjie Du , Yiyuan Yang , Linglong Qian , Jun Wang , Qingsong Wen

PyOD is an open-source Python toolbox for performing scalable outlier detection on multivariate data. Uniquely, it provides access to a wide range of outlier detection algorithms, including established outlier ensembles and more recent…

Machine Learning · Computer Science 2019-06-12 Yue Zhao , Zain Nasrullah , Zheng Li

Every programmer has a characteristic style, ranging from preferences about identifier naming to preferences about object relationships and design patterns. Coding conventions define a consistent syntactic style, fostering readability and…

Software Engineering · Computer Science 2016-11-09 Miltiadis Allamanis , Earl T. Barr , Christian Bird , Charles Sutton

Renaming identifiers in source code is a common refactoring task in software development. When renaming an identifier, other identifiers containing words with the same naming intention related to the renaming should be renamed…

Software Engineering · Computer Science 2024-09-27 Naoki Doi , Yuki Osumi , Shinpei Hayashi

The emergence of online open source repositories in the recent years has led to an explosion in the volume of openly available source code, coupled with metadata that relate to a variety of software development activities. As an effect, in…

Software Engineering · Computer Science 2023-12-05 Vasiliki Efstathiou , Diomidis Spinellis

We introduce a new type of programming challenge called programming puzzles, as an objective and comprehensive evaluation of program synthesis, and release an open-source dataset of Python Programming Puzzles (P3). Each puzzle is defined by…

Machine Learning · Computer Science 2021-11-09 Tal Schuster , Ashwin Kalyan , Oleksandr Polozov , Adam Tauman Kalai

This paper describes the results of a large (+1100 responses) survey of professional software developers concerning standards for naming source code methods. The various standards for source code method names are derived from and supported…

Software Engineering · Computer Science 2021-03-01 Reem S. AlSuhaibani , Christian D. Newman , Michael J. Decker , Michael L. Collard , Jonathan I. Maletic

This paper presents FauxPy, a fault localization tool for Python programs. FauxPy supports seven well-known fault localization techniques in four families: spectrum-based, mutation-based, predicate switching, and stack trace fault…

Software Engineering · Computer Science 2024-04-30 Mohammad Rezaalipour , Carlo A. Furia