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Memristors have uses as artificial synapses and perform well in this role in simulations with artificial spiking neurons. Our experiments show that memristor networks natively spike and can exhibit emergent oscillations and bursting spikes.…

Materials Science · Physics 2014-03-11 Ella Gale , Ben de Lacy Costello , Andrew Adamatzky

In many real-world systems, partial synchronization is the dominant dynamical regime and, in systems such as the brain, is often accompanied by collective oscillations in which multiple overlapping modes interact to produce complex rhythmic…

Adaptation and Self-Organizing Systems · Physics 2026-03-03 Ali Seif , Mina Zarei

Biochemical reactions involving three or more reactants, called higher-molecular reactions, play an important role in theoretical systems and synthetic biology. In particular, such reactions underpin a variety of important bio-dynamical…

Molecular Networks · Quantitative Biology 2021-01-05 Tomislav Plesa

The FS of (ET)8Hg4Cl12(C6H5Br)2 can be regarded as a 2D network of compensated electron and hole orbits coupled by magnetic breakthrough. Simultaneous measurements of the interlayer magnetoresistance and magnetic torque have been performed…

Strongly Correlated Electrons · Physics 2009-11-11 Alain Audouard , David Vignolles , Evert Haanappel , Ilya Sheikin , Rustem B. Lyubovskii , Rimma N. Lyubovskaya

Signaling networks are designed to sense an environmental stimulus and adapt to it. We propose and study a minimal model of signaling network that can sense and respond to external stimuli of varying strength in an adaptive manner. The…

Molecular Networks · Quantitative Biology 2010-09-14 Subhadip Raychaudhuri

We study a system of dynamical units, each of which shows excitable or oscillatory behavior, depending on the choice of parameters. When we couple these units with repressive bonds, we can control the duration of collective oscillations for…

Molecular Networks · Quantitative Biology 2014-02-06 Darka Labavic , Hildegard Meyer-Ortmanns

The efficiency of an encounter-controlled two-channel reaction between two independently-mobile reactants on a lattice is characterized by the mean number $\rt$ of steps to reaction. The two reactants are distinguished by their mass with…

Statistical Mechanics · Physics 2009-11-11 E. Abad , J. J. Kozak

Motivated by investigating multistationarity in biochemical systems, we address saddle-node bifurcations for chemical reaction networks endowed with general kinetics. At positive equilibria, we identify structural network conditions that…

Dynamical Systems · Mathematics 2023-07-24 Nicola Vassena

Stochastic thermodynamics gives universal relations for microscopic entropy production, yet its critical behavior at macroscopic nonequilibrium transitions remains unclassified. We study well-mixed reversible chemical reaction networks in…

Statistical Mechanics · Physics 2026-05-06 Kyota Tamano , Keiji Saito

For an activator-inhibitor reaction-diffusion system in a bounded three-dimensional domain $\Omega$ of $O(1)$ volume and small activator diffusivity of $O(\varepsilon^2)$, we employ a hybrid asymptotic-numerical method to investigate two…

Pattern Formation and Solitons · Physics 2024-12-06 Siwen Deng , Justin Tzou , Shuangquan Xie

Networks of coupled nonlinear oscillators can display a wide range of emergent behaviours under variation of the strength of the coupling. Network equations for pairs of coupled oscillators where the dynamics of each node is described by…

Dynamical Systems · Mathematics 2023-10-05 Rachel Nicks , Robert Allen , Stephen Coombes

In [1], we have shown that the dynamics of an interconnected population of excitatory and inhibitory spiking neurons wandering around a Bogdanov-Takens (BT)bifurcation point can generate the observed scale-free avalanches at the population…

Biological Physics · Physics 2022-04-05 Masud Ehsani , Jürgen Jost

The aim of this work is to make available to the community a large collection of mass-action reaction networks of a given size for further research. The set is limited to what can be computed on a modern multi-core desktop in reasonable…

Molecular Networks · Quantitative Biology 2009-01-21 Anastasia C. Deckard , Frank T. Bergmann , Herbert M. Sauro

In this paper, we study the number of limit cycles that can bifurcate from a periodic annulus in discontinuous planar piecewise linear Hamiltonian differential system with three zones separated by two parallel straight lines, such that the…

Dynamical Systems · Mathematics 2022-07-13 Claudio Pessoa , Ronisio Ribeiro

We study the maximum number of limit cycles that can bifurcate from a degenerate center of a cubic homogeneous polynomial differential system. Using the averaging method of second order and perturbing inside the class of all cubic…

Dynamical Systems · Mathematics 2014-12-11 J. Llibre , C. Pantazi

The binding of molecules, ions or proteins to specific target sites is a generic step for cell activation. However, this step relies on rare events where stochastic particles located in a large bulk are searching for small and often hidden…

Subcellular Processes · Quantitative Biology 2016-05-26 C. Guerrier D. Holcman

Patterns in reaction-diffusion systems often contain two spatial scales; a long scale determined by a typical wavelength or domain size, and a short scale pertaining to front structures separating different domains. Such patterns naturally…

patt-sol · Physics 2009-10-22 Aric Hagberg , Ehud Meron

The Kuramoto model is a standard model for the dynamics of coupled oscillator networks. In particular, it is used to study long time behavior such as phase-locking where all oscillators rotate at a common frequency with fixed angle…

Dynamical Systems · Mathematics 2020-01-30 Timothy Ferguson

In living cells, chemical reactions form a complex network. Complicated dynamics arising from such networks are the origins of biological functions. We propose a novel mathematical method to analyze bifurcation behaviors of a reaction…

Molecular Networks · Quantitative Biology 2018-08-08 Takashi Okada , Je-Chiang Tsai , Atsushi Mochizuki

We describe a solvable model of a phase oscillator network on a circle with infinite-range Mexican-hat-type interaction. We derive self-consistent equations of the order parameters and obtain three non-trivial solutions characterized by the…

Disordered Systems and Neural Networks · Physics 2015-06-04 Tatsuya Uezu , Tomoyuki Kimoto , Masato Okada