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In this article is shown that large systems endowing phase coexistence display self-oscillations in presence of linear feedback between the control and order parameters, where an Andronov-Hopf bifurcation takes over the phase transition.…

Statistical Mechanics · Physics 2018-01-18 Daniele De Martino

Oscillatory dynamics are ubiquitous in biological networks. Possible sources of oscillations are well understood in low-dimensional systems, but have not been fully explored in high-dimensional networks. Here we study large networks…

Disordered Systems and Neural Networks · Physics 2016-12-21 Célian Bimbard , Erwan Ledoux , Srdjan Ostojic

Characterizing metastable neural dynamics in finite-size spiking networks remains a daunting challenge. We propose to address this challenge in the recently introduced replica-mean-field (RMF) limit. In this limit, networks are made of…

Neurons and Cognition · Quantitative Biology 2022-10-12 Luyan Yu , Thibaud Taillefumier

We obtain exact analytical expressions for the electronic transport through a multi-channel system, also with an applied magnetic field. The geometrical structure of the electrodes is found to cause a splitting of the conduction band into…

Mesoscale and Nanoscale Physics · Physics 2008-02-03 Yan Chen , Shi-Jie Xiong , S. N. Evangelou

This paper analyses of a stochastic model of a chemical reaction network with three types of chemical species ${\cal R}$, ${\cal M}$ and ${\cal U}$ that interact to transform a flow of external resources, the chemical species ${\cal Q}$, to…

Probability · Mathematics 2025-12-01 Vincent Fromion , Philippe Robert , Jana Zaherddine

For reaction networks arising in systems biology, the capacity for two or more steady states, that is, multistationarity, is an important property that underlies biochemical switches. Another property receiving much attention recently is…

Probability · Mathematics 2023-01-26 Badal Joshi , Nidhi Kaihnsa , Tung D. Nguyen , Anne Shiu

The emergence of collective oscillations and synchronization is a widespread phenomenon in complex systems. While widely studied in dynamical systems theory, this phenomenon is not well understood in the context of out-of-equilibrium phase…

Statistical Mechanics · Physics 2023-06-06 Dmitry Sinelschikov , Anna Poggialini , Maria Francesca Abbate , Daniele De Martino

A multistationarity region is the part of a reaction network's parameter space that gives rise to multiple steady states. Mathematically, this region consists of the positive parameters for which a parametrized family of polynomial…

Dynamical Systems · Mathematics 2024-04-08 Allison McClure , Anne Shiu

We study the bifurcations and phase diagram for a network of identical Kuramoto oscillators with a coupling that explicitly breaks the rotational symmetry of the equations. Applying the Watanabe-Strogatz ansatz, the original N-dimensional…

Chaotic Dynamics · Physics 2025-09-05 Antonio Mihara , Rene O. Medrano-T

This article outlines sufficient conditions under which a one-dimensional chain of identical nonlinear oscillators can display complex spatio-temporal behavior. The units are described by phase equations and consist of excitable…

Chaotic Dynamics · Physics 2017-06-08 Leandro M. Alonso

This work deals with bifurcation and the chaotic behavior in one dimensional chains of small particles. We consider two distinct possibilities, one where the particles are modeled by a fourth-order potential which was already studied. We…

Chaotic Dynamics · Physics 2022-07-07 Fabiano C. Simas , K. Z. Nobrega , D. Bazeia

We study numerically and analytically first- and second-order phase transitions in neuronal networks stimulated by shot noise (a flow of random spikes bombarding neurons). Using an exactly solvable cortical model of neuronal networks on…

Neurons and Cognition · Quantitative Biology 2015-08-25 K. -E. Lee , M. A. Lopes , J. F. F. Mendes , A. V. Goltsev

Two new classes of networks are introduced that resemble small-world properties. These networks are recursively constructed but retain a fixed, regular degree. They consist of a one-dimensional lattice backbone overlayed by a hierarchical…

Disordered Systems and Neural Networks · Physics 2008-05-29 S. Boettcher , B. Goncalves , H. Guclu

The number of molecules involved in a cell or subcellular structure is sometimes rather small. In this situation, ordinary macroscopic-level fluctuations can be overwhelmed by non-negligible large fluctuations, which results in drastic…

Molecular Networks · Quantitative Biology 2016-11-15 Nen Saito , Yuki Sughiyama , Kunihiko Kaneko

In the classic view of cortical rhythms, the interaction between excitatory pyramidal neurons (E) and inhibitory parvalbumin neurons (I) has been shown to be sufficient to generate gamma and beta band rhythms. However, it is now clear that…

Neurons and Cognition · Quantitative Biology 2025-10-27 Arnab Dey Sarkar , Bard Ermentrout

We investigate six operations on chemical reaction networks, all of which have been proven to preserve important dynamical properties, namely, the capacity for nondegenerate multistationarity (multiple steady states) and periodic orbits.…

Dynamical Systems · Mathematics 2024-12-03 Awildo Gutierrez , Elijah Leake , Caelyn Rivas-Sobie , Jordy Lopez Garcia , Anne Shiu

We study water-in-oil emulsion droplets, running the Belousov-Zhabotinsky reaction, that form a new type of active matter unit. These droplets, stabilised by surfactants dispersed in the oil medium, are capable of internal chemical…

Soft Condensed Matter · Physics 2012-06-14 Shashi Thutupalli , Stephan Herminghaus

The behavior at bifurcation from global synchronization to partial synchronization in finite networks of coupled oscillators is a complex phenomenon, involving the intricate dynamics of one or more oscillators with the remaining…

Adaptation and Self-Organizing Systems · Physics 2021-07-09 Lauren D Smith , Georg A Gottwald

Organisms often use cyclic changes in the concentrations of chemicals species to precisely time biological functions. Underlying these biochemical clocks are chemical reactions and transport processes, which are inherently stochastic.…

Statistical Mechanics · Physics 2020-02-06 Clara del Junco , Suriyanarayanan Vaikuntanathan

Networks of coupled degrade-and-fire (DF) oscillators are simple dynamical models of assemblies of interacting self-repressing genes. For mean-field interactions, which most mathematical studies have assumed so far, every trajectory must…

Adaptation and Self-Organizing Systems · Physics 2016-05-25 Alex Blumenthal , Bastien Fernandez