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The volume estimation of brain regions from MRI data is a key problem in many clinical applications, where the acquisition of data at high spatial resolution is desirable. While parallel MRI and constrained image reconstruction algorithms…

Image and Video Processing · Electrical Eng. & Systems 2021-05-20 Aniket Pramanik , Xiaodong Wu , Mathews Jacob

Magnetic Resonance Imaging (MRI) provides detailed structural information, while functional MRI (fMRI) captures temporal brain activity. In this work, we present a multimodal deep learning framework that integrates MRI and fMRI for…

Computer Vision and Pattern Recognition · Computer Science 2026-03-17 Anima Kujur , Zahra Monfared

Magnetic Resonance Imaging can produce detailed images of the anatomy and physiology of the human body that can assist doctors in diagnosing and treating pathologies such as tumours. However, MRI suffers from very long acquisition times…

Image and Video Processing · Electrical Eng. & Systems 2022-03-30 George Yiasemis , Jan-Jakob Sonke , Clarisa Sánchez , Jonas Teuwen

Mapping deep neural networks (DNNs) to hardware is critical for optimizing latency, energy consumption, and resource utilization, making it a cornerstone of high-performance accelerator design. Due to the vast and complex mapping space,…

In drug discovery, molecular optimization aims to iteratively refine a lead compound to improve molecular properties while preserving structural similarity to the original molecule. However, each oracle evaluation is expensive, making…

Machine Learning · Computer Science 2026-04-15 Ziqing Wang , Yibo Wen , Abhishek Pandy , Han Liu , Kaize Ding

Magnetic Resonance Image (MRI) acquisition is an inherently slow process which has spurred the development of two different acceleration methods: acquiring multiple correlated samples simultaneously (parallel imaging) and acquiring fewer…

Image and Video Processing · Electrical Eng. & Systems 2020-04-01 Anuroop Sriram , Jure Zbontar , Tullie Murrell , C. Lawrence Zitnick , Aaron Defazio , Daniel K. Sodickson

While humans excel at continual learning (CL), deep neural networks (DNNs) exhibit catastrophic forgetting. A salient feature of the brain that allows effective CL is that it utilizes multiple modalities for learning and inference, which is…

Machine Learning · Computer Science 2024-05-07 Fahad Sarfraz , Bahram Zonooz , Elahe Arani

Purpose: To develop a deep-learning-based image reconstruction framework for reproducible research in MRI. Methods: The BART toolbox offers a rich set of implementations of calibration and reconstruction algorithms for parallel imaging and…

Computer Vision and Pattern Recognition · Computer Science 2024-02-20 Moritz Blumenthal , Guanxiong Luo , Martin Schilling , H. Christian M. Holme , Martin Uecker

Multi-objective reinforcement learning (MORL) excels at handling rapidly changing preferences in tasks that involve multiple criteria, even for unseen preferences. However, previous dominating MORL methods typically generate a fixed policy…

Machine Learning · Computer Science 2025-05-09 Ruohong Liu , Yuxin Pan , Linjie Xu , Lei Song , Jiang Bian , Pengcheng You , Yize Chen

We present a foundation model for brain MRI that can work with different combinations of imaging sequences. The model uses one encoder with learnable modality embeddings, conditional layer normalization, and a masked autoencoding objective…

Computer Vision and Pattern Recognition · Computer Science 2025-11-06 Minh Sao Khue Luu , Bair N. Tuchinov

Multi-objective reinforcement learning (MORL) is the generalization of standard reinforcement learning (RL) approaches to solve sequential decision making problems that consist of several, possibly conflicting, objectives. Generally, in…

Artificial Intelligence · Computer Science 2019-10-08 Xi Chen , Ali Ghadirzadeh , Mårten Björkman , Patric Jensfelt

Manifold learning using deep neural networks been shown to be an effective tool for building sophisticated prior image models that can be applied to noise reduction in low-dose CT. We propose a new iterative CT reconstruction algorithm,…

Medical Physics · Physics 2020-10-20 Matthew Tivnan , J. Webster Stayman

With the successful application of deep learning to magnetic resonance (MR) imaging, parallel imaging techniques based on neural networks have attracted wide attention. However, in the absence of high-quality, fully sampled datasets for…

Image and Video Processing · Electrical Eng. & Systems 2022-11-15 Shanshan Wang , Ruoyou Wu , Cheng Li , Juan Zou , Ziyao Zhang , Qiegen Liu , Yan Xi , Hairong Zheng

Despite the evolution of Convolutional Neural Networks (CNNs), their performance is surprisingly dependent on the choice of hyperparameters. However, it remains challenging to efficiently explore large hyperparameter search space due to the…

Computer Vision and Pattern Recognition · Computer Science 2022-09-27 HyunJae Lee , Gihyeon Lee , Junhwan Kim , Sungjun Cho , Dohyun Kim , Donggeun Yoo

The integration of multi-modal Magnetic Resonance Imaging (MRI) and clinical data holds great promise for enhancing the diagnosis of neurological disorders (NDs) in real-world clinical settings. Deep Learning (DL) has recently emerged as a…

Image and Video Processing · Electrical Eng. & Systems 2025-06-19 Wajih Hassan Raza , Aamir Bader Shah , Yu Wen , Yidan Shen , Juan Diego Martinez Lemus , Mya Caryn Schiess , Timothy Michael Ellmore , Renjie Hu , Xin Fu

Multi-modal magnetic resonance imaging (MRI) is essential for providing complementary information about brain anatomy and pathology, leading to more accurate diagnoses. However, obtaining high-quality multi-modal MRI in a clinical setting…

Image and Video Processing · Electrical Eng. & Systems 2025-04-15 Minjoo Lim , Bogyeong Kang , Tae-Eui Kam

Multimodal learning has been lacking principled ways of combining information from different modalities and learning a low-dimensional manifold of meaningful representations. We study multimodal learning and sensor fusion from a latent…

Machine Learning · Computer Science 2019-04-24 Lijiang Guo

Purpose: To propose a wave-encoded model-based deep learning (wave-MoDL) strategy for highly accelerated 3D imaging and joint multi-contrast image reconstruction, and further extend this to enable rapid quantitative imaging using an…

Image and Video Processing · Electrical Eng. & Systems 2022-02-08 Jaejin Cho , Borjan Gagoski , Taehyung Kim , Qiyuan Tian , Stephen Robert Frost , Itthi Chatnuntawech , Berkin Bilgic

Image registration plays an important role in medical image analysis. Conventional optimization based methods provide an accurate estimation due to the iterative process at the cost of expensive computation. Deep learning methods such as…

Computer Vision and Pattern Recognition · Computer Science 2021-06-21 Junshen Xu , Eric Z. Chen , Xiao Chen , Terrence Chen , Shanhui Sun

Motion-compensated MR reconstruction (MCMR) is a powerful concept with considerable potential, consisting of two coupled sub-problems: Motion estimation, assuming a known image, and image reconstruction, assuming known motion. In this work,…

Image and Video Processing · Electrical Eng. & Systems 2022-09-09 Jiazhen Pan , Daniel Rueckert , Thomas Küstner , Kerstin Hammernik