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Data attribution methods aim to quantify the influence of individual training samples on the prediction of artificial intelligence (AI) models. As training data plays an increasingly crucial role in the modern development of large-scale AI…

Machine Learning · Computer Science 2024-10-08 Junwei Deng , Ting-Wei Li , Shiyuan Zhang , Shixuan Liu , Yijun Pan , Hao Huang , Xinhe Wang , Pingbang Hu , Xingjian Zhang , Jiaqi W. Ma

TextDescriptives is a Python package for calculating a large variety of metrics from text. It is built on top of spaCy and can be easily integrated into existing workflows. The package has already been used for analysing the linguistic…

Computation and Language · Computer Science 2023-10-30 Lasse Hansen , Ludvig Renbo Olsen , Kenneth Enevoldsen

In this paper, we introduce d3rlpy, an open-sourced offline deep reinforcement learning (RL) library for Python. d3rlpy supports a set of offline deep RL algorithms as well as off-policy online algorithms via a fully documented…

Machine Learning · Computer Science 2022-12-06 Takuma Seno , Michita Imai

Machine learning models of materials$^{1-5}$ accelerate discovery compared to ab initio methods: deep learning models now reproduce density functional theory (DFT)-calculated results at one hundred thousandths of the cost of DFT$^{6}$. To…

Automatic design of organic materials requires black-box optimization in a vast chemical space. In conventional molecular design algorithms, a molecule is built as a combination of predetermined fragments. Recently, deep neural network…

Chemical Physics · Physics 2018-06-27 Xiufeng Yang , Jinzhe Zhang , Kazuki Yoshizoe , Kei Terayama , Koji Tsuda

We present ktrain, a low-code Python library that makes machine learning more accessible and easier to apply. As a wrapper to TensorFlow and many other libraries (e.g., transformers, scikit-learn, stellargraph), it is designed to make…

Machine Learning · Computer Science 2022-04-07 Arun S. Maiya

We present dPASP, a novel declarative probabilistic logic programming framework for differentiable neuro-symbolic reasoning. The framework allows for the specification of discrete probabilistic models with neural predicates, logic…

Artificial Intelligence · Computer Science 2023-08-08 Renato Lui Geh , Jonas Gonçalves , Igor Cataneo Silveira , Denis Deratani Mauá , Fabio Gagliardi Cozman

Many atomic descriptors are currently limited by their unfavourable scaling with the number of chemical elements $S$ e.g. the length of body-ordered descriptors, such as the Smooth Overlap of Atomic Positions (SOAP) power spectrum (3-body)…

Materials Science · Physics 2022-12-07 James P. Darby , James R. Kermode , Gábor Csányi

Image keypoints and descriptors play a crucial role in many visual measurement tasks. In recent years, deep neural networks have been widely used to improve the performance of keypoint and descriptor extraction. However, the conventional…

Computer Vision and Pattern Recognition · Computer Science 2023-04-18 Xiaoming Zhao , Xingming Wu , Weihai Chen , Peter C. Y. Chen , Qingsong Xu , Zhengguo Li

We present Decapodes, a diagrammatic tool for representing, composing, and solving partial differential equations. Decapodes provides an intuitive diagrammatic representation of the relationships between variables in a system of equations,…

Numerical Analysis · Mathematics 2024-02-01 Luke Morris , Andrew Baas , Jesus Arias , Maia Gatlin , Evan Patterson , James P. Fairbanks

The time series classification literature has expanded rapidly over the last decade, with many new classification approaches published each year. Prior research has mostly focused on improving the accuracy and efficiency of classifiers,…

Machine Learning · Computer Science 2020-06-03 Thach Le Nguyen , Severin Gsponer , Iulia Ilie , Martin O'Reilly , Georgiana Ifrim

We present work flows and a software module for machine learning model building in surface science and heterogeneous catalysis. This includes fingerprinting atomic structures from 3D structure and/or connectivity information, it includes…

The article presents the torchosr package - a Python package compatible with PyTorch library - offering tools and methods dedicated to Open Set Recognition in Deep Neural Networks. The package offers two state-of-the-art methods in the…

Machine Learning · Computer Science 2024-02-12 Joanna Komorniczak , Pawel Ksieniewicz

The direpack package aims to establish a set of modern statistical dimension reduction techniques into the Python universe as a single, consistent package. The dimension reduction methods included resort into three categories: projection…

Computation · Statistics 2020-06-03 Emmanuel Jordy Menvouta , Sven Serneels , Tim Verdonck

Understanding the kinetics of drug-protein interactions is paramount for drug design, yet the field lacks large-scale, dynamic data to move beyond static structural analysis. Here, we present DD-03B, a massively scalable database providing…

Computational Physics · Physics 2026-04-09 Maodong Li , Dechin Chen , Zhijun Pan , Zhe Wang , Yi Isaac Yang

Retrieval-augmented in-context learning has emerged as a powerful approach for addressing knowledge-intensive tasks using frozen language models (LM) and retrieval models (RM). Existing work has combined these in simple "retrieve-then-read"…

Computation and Language · Computer Science 2023-01-24 Omar Khattab , Keshav Santhanam , Xiang Lisa Li , David Hall , Percy Liang , Christopher Potts , Matei Zaharia

DeePMD-kit is a powerful open-source software package that facilitates molecular dynamics simulations using machine learning potentials (MLP) known as Deep Potential (DP) models. This package, which was released in 2017, has been widely…

PYROBOCOP is a Python-based package for control, optimization and estimation of robotic systems described by nonlinear Differential Algebraic Equations (DAEs). In particular, the package can handle systems with contacts that are described…

Robotics · Computer Science 2022-03-21 Arvind Raghunathan , Devesh K. Jha , Diego Romeres

Most machine learning models for materials science rely on descriptors based on materials compositions and structures, even though the chemical bond has been proven to be a valuable concept for predicting materials properties. Over the…

Script identification plays a vital role in applications that involve handwriting and document analysis within a multi-script and multi-lingual environment. Moreover, it exhibits a profound connection with human cognition. This paper…

Computer Vision and Pattern Recognition · Computer Science 2024-05-30 Miguel A. Ferrer , Abhijit Das , Moises Diaz , Aythami Morales , Cristina Carmona-Duarte , Umapada Pal