Compressing local atomic neighbourhood descriptors
Abstract
Many atomic descriptors are currently limited by their unfavourable scaling with the number of chemical elements e.g. the length of body-ordered descriptors, such as the Smooth Overlap of Atomic Positions (SOAP) power spectrum (3-body) and the Atomic Cluster Expansion (ACE) (multiple body-orders), scales as where is the body-order and is the number of radial basis functions used in the density expansion. We introduce two distinct approaches which can be used to overcome this scaling for the SOAP power spectrum. Firstly, we show that the power spectrum is amenable to lossless compression with respect to both and , so that the descriptor length can be reduced from to . Secondly, we introduce a generalized SOAP kernel, where compression is achieved through the use of the total, element agnostic density, in combination with radial projection. The ideas used in the generalized kernel are equally applicably to any other body-ordered descriptors and we demonstrate this for the Atom Centered Symmetry Functions (ACSF). Finally, both compression approaches are shown to offer comparable performance to the original descriptor across a variety of numerical tests.
Keywords
Cite
@article{arxiv.2112.13055,
title = {Compressing local atomic neighbourhood descriptors},
author = {James P. Darby and James R. Kermode and Gábor Csányi},
journal= {arXiv preprint arXiv:2112.13055},
year = {2022}
}
Comments
16 pages, 10 figures