Related papers: Exploring Partial Knowledge Base Inference in Biom…

Zero-shot entity linking (EL) aims at aligning entity mentions to unseen entities to challenge the generalization ability. Previous methods largely focus on the candidate retrieval stage and ignore the essential candidate ranking stage,…

Although biomedical entity linking (BioEL) has made significant progress with pre-trained language models, challenges still exist for fine-grained and long-tailed entities. To address these challenges, we present BioELQA, a novel model that…

This paper presents a novel approach to address the Entity Recognition and Linking Challenge at NLPCC 2015. The task involves extracting named entity mentions from short search queries and linking them to entities within a reference Chinese…

The Entity Disambiguation and Linking (EDL) task matches entity mentions in text to a unique Knowledge Base (KB) identifier such as a Wikipedia or Freebase id. It plays a critical role in the construction of a high quality information…

Multilingual knowledge graph (KG) embeddings provide latent semantic representations of entities and structured knowledge with cross-lingual inferences, which benefit various knowledge-driven cross-lingual NLP tasks. However, precisely…

Training a Named Entity Recognition (NER) model often involves fixing a taxonomy of entity types. However, requirements evolve and we might need the NER model to recognize additional entity types. A simple approach is to re-annotate entire…

Entity Recognition (ER) within a text is a fundamental exercise in Natural Language Processing, enabling further depending tasks such as Knowledge Extraction, Text Summarisation, or Keyphrase Extraction. An entity consists of single words…

Most Named Entity Recognition (NER) models operate under the assumption that training datasets are fully labelled. While it is valid for established datasets like CoNLL 2003 and OntoNotes, sometimes it is not feasible to obtain the complete…

The growth rate in the amount of biomedical documents is staggering. Unlocking information trapped in these documents can enable researchers and practitioners to operate confidently in the information world. Biomedical NER, the task of…

In our continuously evolving world, entities change over time and new, previously non-existing or unknown, entities appear. We study how this evolutionary scenario impacts the performance on a well established entity linking (EL) task. For…

Most named entity recognition (NER) systems focus on improving model performance, ignoring the need to quantify model uncertainty, which is critical to the reliability of NER systems in open environments. Evidential deep learning (EDL) has…

Linking textual values in tabular data to their corresponding entities in a Knowledge Base is a core task across a variety of data integration and enrichment applications. Although Large Language Models (LLMs) have shown State-of-The-Art…

Supervised machine learning assumes the availability of fully-labeled data, but in many cases, such as low-resource languages, the only data available is partially annotated. We study the problem of Named Entity Recognition (NER) with…

Biomedical named entity recognition (NER) is a fundamental task in text mining of medical documents and has many applications. Deep learning based approaches to this task have been gaining increasing attention in recent years as their…

Understanding the meaning of text often involves reasoning about entities and their relationships. This requires identifying textual mentions of entities, linking them to a canonical concept, and discerning their relationships. These tasks…

Recognizing spans of biomedical concepts and their types (e.g., drug or gene) in free text, often called biomedical named entity recognition (NER), is a basic component of information extraction (IE) pipelines. Without a strong NER…

Tools to explore scientific literature are essential for scientists, especially in biomedicine, where about a million new papers are published every year. Many such tools provide users the ability to search for specific entities (e.g.…

Supervised named entity recognition (NER) in the biomedical domain depends on large sets of annotated texts with the given named entities. The creation of such datasets can be time-consuming and expensive, while extraction of new entities…

When working with any sort of knowledge base (KB) one has to make sure it is as complete and also as up-to-date as possible. Both tasks are non-trivial as they require recall-oriented efforts to determine which entities and relationships…

Named entity recognition (NER) identifies typed entity mentions in raw text. While the task is well-established, there is no universally used tagset: often, datasets are annotated for use in downstream applications and accordingly only…