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Clustering is indispensable for data analysis in many scientific disciplines. Detecting clusters from heavy noise remains challenging, particularly for high-dimensional sparse data. Based on graph-theoretic framework, the present paper…

Computer Vision and Pattern Recognition · Computer Science 2014-07-08 Deli Zhao , Xiaoou Tang

This paper studies the nucleus decomposition problem, which has been shown to be useful in finding dense substructures in graphs. We present a novel parallel algorithm that is efficient both in theory and in practice. Our algorithm achieves…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-08-12 Jessica Shi , Laxman Dhulipala , Julian Shun

Although previous graph-based multi-view clustering algorithms have gained significant progress, most of them are still faced with three limitations. First, they often suffer from high computational complexity, which restricts their…

Machine Learning · Computer Science 2023-03-23 Si-Guo Fang , Dong Huang , Xiao-Sha Cai , Chang-Dong Wang , Chaobo He , Yong Tang

We study dynamic graph algorithms in the Massively Parallel Computation model, which was inspired by practical data processing systems. Our goal is to provide algorithms that can efficiently handle large batches of edge insertions and…

Data Structures and Algorithms · Computer Science 2021-01-12 Krzysztof Nowicki , Krzysztof Onak

Graph clustering is a basic technique in machine learning, and has widespread applications in different domains. While spectral techniques have been successfully applied for clustering undirected graphs, the performance of spectral…

Machine Learning · Computer Science 2019-08-07 Mihai Cucuringu , Huan Li , He Sun , Luca Zanetti

Graph-cuts are widely used in computer vision. In order to speed up the optimization process and improve the scalability for large graphs, Strandmark and Kahl introduced a splitting method to split a graph into multiple subgraphs for…

Data Structures and Algorithms · Computer Science 2016-11-03 Miao Yu , Shuhan Shen , Zhanyi Hu

In this work we propose a simple and easily parallelizable algorithm for multiway graph partitioning. The algorithm alternates between three basic components: diffusing seed vertices over the graph, thresholding the diffused seeds, and then…

Machine Learning · Statistics 2014-06-17 Xavier Bresson , Huiyi Hu , Thomas Laurent , Arthur Szlam , James von Brecht

There are two intertwined factors that affect performance of concurrent data structures: the ability of processes to access the data in parallel and the cost of synchronization. It has been observed that for a large class of…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-05-10 Vitaly Aksenov , Petr Kuznetsov

Preferential attachment lies at the heart of many network models aiming to replicate features of real world networks. To simulate the attachment process, conduct statistical tests, or obtain input data for benchmarks, efficient algorithms…

Data Structures and Algorithms · Computer Science 2023-01-18 Daniel Allendorf , Ulrich Meyer , Manuel Penschuck , Hung Tran

This paper presents a novel meta algorithm, Partition-Merge (PM), which takes existing centralized algorithms for graph computation and makes them distributed and faster. In a nutshell, PM divides the graph into small subgraphs using our…

Data Structures and Algorithms · Computer Science 2013-09-25 Vincent Blondel , Kyomin Jung , Pushmeet Kohli , Devavrat Shah

We investigate the problem of multiplex graph embedding, that is, graphs in which nodes interact through multiple types of relations (dimensions). In recent years, several methods have been developed to address this problem. However, the…

Machine Learning · Computer Science 2023-12-29 Kamel Abdous , Nairouz Mrabah , Mohamed Bouguessa

Breadth-first Search (BFS) is one of the most important graph processing subroutines, especially for computing the unweighted distance. Many applications may require running BFS from multiple sources. Sequentially, when running BFS on a…

Data Structures and Algorithms · Computer Science 2024-10-29 Letong Wang , Guy Blelloch , Yan Gu , Yihan Sun

The objective of clustering is to discover natural groups in datasets and to identify geometrical structures which might reside there, without assuming any prior knowledge on the characteristics of the data. The problem can be seen as…

Computational Geometry · Computer Science 2018-01-26 Luis-Evaristo Caraballo , José-Miguel Díaz-Báñez , Nadine Kroher

Iterative graph algorithms often compute intermediate values and update them as computation progresses. Updated output values are used as inputs for computations in current or subsequent iterations; hence the number of iterations required…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-10-05 Mark P. Blanco , Scott McMillan , Tze Meng Low

One of the simplest problems on directed graphs is that of identifying the set of vertices reachable from a designated source vertex. This problem can be solved easily sequentially by performing a graph search, but efficient parallel…

Data Structures and Algorithms · Computer Science 2017-11-07 Jeremy T. Fineman

Graph clustering and community detection are central problems in modern data mining. The increasing need for analyzing billion-scale data calls for faster and more scalable algorithms for these problems. There are certain trade-offs between…

Social and Information Networks · Computer Science 2021-08-05 Jessica Shi , Laxman Dhulipala , David Eisenstat , Jakub Łącki , Vahab Mirrokni

Motivation: With the development of droplet based systems, massive single cell transcriptome data has become available, which enables analysis of cellular and molecular processes at single cell resolution and is instrumental to…

Machine Learning · Computer Science 2018-12-27 Tiehang Duan , José P. Pinto , Xiaohui Xie

We study the problem of dynamically maintaining the connected components of an undirected graph subject to edge insertions and deletions. We give the first parallel algorithm for the problem which is work-efficient, supports batches of…

Data Structures and Algorithms · Computer Science 2024-11-19 Quinten De Man , Laxman Dhulipala , Adam Karczmarz , Jakub Łącki , Julian Shun , Zhongqi Wang

We use exponential start time clustering to design faster and more work-efficient parallel graph algorithms involving distances. Previous algorithms usually rely on graph decomposition routines with strict restrictions on the diameters of…

Data Structures and Algorithms · Computer Science 2015-06-25 Gary L. Miller , Richard Peng , Adrian Vladu , Shen Chen Xu

Tabular datasets play a crucial role in various applications. Thus, developing efficient, effective, and widely compatible prediction algorithms for tabular data is important. Currently, two prominent model types, Gradient Boosted Decision…

Machine Learning · Computer Science 2024-07-16 Jiahuan Yan , Jintai Chen , Qianxing Wang , Danny Z. Chen , Jian Wu