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Attribute extrapolation in sample generation is challenging for deep neural networks operating beyond the training distribution. We formulate a new task for extrapolation in sequence generation, focusing on natural language and proteins,…

Machine Learning · Computer Science 2021-10-27 Alvin Chan , Ali Madani , Ben Krause , Nikhil Naik

This paper aims to address the challenge of data generation beyond the training data and proposes a framework for Structural Extrapolated Data GEneration (SEDGE) based on suitable assumptions on the underlying data-generating process. We…

Machine Learning · Computer Science 2026-05-15 Kun Zhang , Jiaqi Sun , Yiqing Li , Ignavier Ng , Namrata Deka , Shaoan Xie

The design of novel protein sequences with targeted functionalities underpins a central theme in protein engineering, impacting diverse fields such as drug discovery and enzymatic engineering. However, navigating this vast combinatorial…

Biomolecules · Quantitative Biology 2024-02-19 Yiheng Zhu , Zitai Kong , Jialu Wu , Weize Liu , Yuqiang Han , Mingze Yin , Hongxia Xu , Chang-Yu Hsieh , Tingjun Hou

Generative artificial intelligence models learn probability distributions from data and produce novel samples that capture the salient properties of their training sets. Proteins are particularly attractive for such approaches given their…

Biomolecules · Quantitative Biology 2026-02-27 Filippo Stocco , Michele Garibbo , Noelia Ferruz

This article makes discrete masked models for the generative modeling of discrete data controllable. The goal is to generate samples of a discrete random variable that adheres to a posterior distribution, satisfies specific constraints, or…

Machine Learning · Computer Science 2024-10-04 Wei Guo , Yuchen Zhu , Molei Tao , Yongxin Chen

Deep learning inspired by differential equations is a recent research trend and has marked the state of the art performance for many machine learning tasks. Among them, time-series modeling with neural controlled differential equations…

Machine Learning · Computer Science 2022-09-22 Sheo Yon Jhin , Jaehoon Lee , Minju Jo , Seungji Kook , Jinsung Jeon , Jihyeon Hyeong , Jayoung Kim , Noseong Park

We suggest ways to enforce given constraints in the output of a Generative Adversarial Network (GAN) generator both for interpolation and extrapolation (prediction). For the case of dynamical systems, given a time series, we wish to train…

Machine Learning · Computer Science 2019-09-04 Panos Stinis , Tobias Hagge , Alexandre M. Tartakovsky , Enoch Yeung

This paper shows that masked autoencoder with extrapolator (ExtraMAE) is a scalable self-supervised model for time series generation. ExtraMAE randomly masks some patches of the original time series and learns temporal dynamics by…

Machine Learning · Computer Science 2022-05-20 Mengyue Zha , SiuTim Wong , Mengqi Liu , Tong Zhang , Kani Chen

We conduct an empirical evaluation of extrapolation performance when conditioning on scalar control inputs like desired output length, desired edit from an input sentence, and desired sentiment across three text generation tasks.…

Computation and Language · Computer Science 2021-04-19 Aashi Jain , Taylor Berg-Kirkpatrick

Controllable text generation is a fundamental aspect of natural language generation, with numerous methods proposed for different constraint types. However, these approaches often require significant architectural or decoding modifications,…

Computation and Language · Computer Science 2023-09-21 Xin Zheng , Hongyu Lin , Xianpei Han , Le Sun

Generative models can be trained to emulate complex empirical data, but are they useful to make predictions in the context of previously unobserved environments? An intuitive idea to promote such extrapolation capabilities is to have the…

Machine Learning · Computer Science 2022-01-03 Michel Besserve , Rémy Sun , Dominik Janzing , Bernhard Schölkopf

Image extrapolation aims at expanding the narrow field of view of a given image patch. Existing models mainly deal with natural scene images of homogeneous regions and have no control of the content generation process. In this work, we…

Computer Vision and Pattern Recognition · Computer Science 2019-12-30 Yijun Li , Lu Jiang , Ming-Hsuan Yang

Self-evolution methods enhance code generation through iterative "generate-verify-refine" cycles, yet existing approaches suffer from low exploration efficiency, failing to discover solutions with superior complexity within limited budgets.…

Computation and Language · Computer Science 2026-02-13 Tu Hu , Ronghao Chen , Shuo Zhang , Jianghao Yin , Mou Xiao Feng , Jingping Liu , Shaolei Zhang , Wenqi Jiang , Yuqi Fang , Sen Hu , Huacan Wang , Yi Xu

Generative models in molecular design tend to be richly parameterized, data-hungry neural models, as they must create complex structured objects as outputs. Estimating such models from data may be challenging due to the lack of sufficient…

Machine Learning · Computer Science 2021-08-17 Kevin Yang , Wengong Jin , Kyle Swanson , Regina Barzilay , Tommi Jaakkola

Deep generative models have been widely used for their ability to generate realistic data samples in various areas, such as images, molecules, text, and speech. One major goal of data generation is controllability, namely to generate new…

Machine Learning · Computer Science 2023-10-12 Bo Pan , Muran Qin , Shiyu Wang , Yifei Zhang , Liang Zhao

Generative modeling has become a central paradigm in protein research, extending machine learning beyond structure prediction toward sequence design, backbone generation, inverse folding, and biomolecular interaction modeling. However, the…

Machine Learning · Computer Science 2026-03-30 Senura Hansaja Wanasekara , Minh-Duong Nguyen , Xiaochen Liu , Nguyen H. Tran , Ken-Tye Yong

Sequence generation applications require satisfying semantic constraints, such as ensuring that programs are correct, using certain keywords, or avoiding undesirable content. Language models, whether fine-tuned or prompted with few-shot…

Computation and Language · Computer Science 2022-11-02 Sean Welleck , Ximing Lu , Peter West , Faeze Brahman , Tianxiao Shen , Daniel Khashabi , Yejin Choi

Constrained generative modeling is fundamental to applications such as robotic control and autonomous driving, where models must respect physical laws and safety-critical constraints. In real-world settings, these constraints rarely take…

Machine Learning · Computer Science 2026-03-10 Xiaoxuan Liang , Saeid Naderiparizi , Yunpeng Liu , Berend Zwartsenberg , Frank Wood

Recently introduced generative adversarial network (GAN) has been shown numerous promising results to generate realistic samples. The essential task of GAN is to control the features of samples generated from a random distribution. While…

Machine Learning · Computer Science 2019-04-02 Minhyeok Lee , Junhee Seok

Target speech extraction (TSE) isolates the speech of a specific speaker from a multi-talker overlapped speech mixture. Most existing TSE models rely on discriminative methods, typically predicting a time-frequency spectrogram mask for the…

Audio and Speech Processing · Electrical Eng. & Systems 2025-05-22 Hao Ma , Rujin Chen , Xiao-Lei Zhang , Ju Liu , Xuelong Li
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