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Metric graphs are meaningful objects for modeling complex structures that arise in many real-world applications, such as road networks, river systems, earthquake faults, blood vessels, and filamentary structures in galaxies. To study metric…

Algebraic Topology · Mathematics 2018-12-14 Ellen Gasparovic , Maria Gommel , Emilie Purvine , Radmila Sazdanovic , Bei Wang , Yusu Wang , Lori Ziegelmeier

In this paper, we explore how to use topological tools to compare dimension reduction methods. We first make a brief overview of some of the methods often used dimension reduction such as Isometric Feature Mapping, Laplacian Eigenmaps, Fast…

Geometric Topology · Mathematics 2023-06-06 Eddy Kwessi

This paper presents a new mesh segmentation method that integrates geometrical and topological features through a flexible Reeb graph representation. The algorithm consists of three phases: construction of the Reeb graph using the improved…

Graphics · Computer Science 2025-01-22 Florian Beguet , Sandrine Lanquetin , Romain Raffin

The Wasserstein distance has become increasingly important in machine learning and deep learning. Despite its popularity, the Wasserstein distance is hard to approximate because of the curse of dimensionality. A recently proposed approach…

Machine Learning · Computer Science 2021-09-29 Minhui Huang , Shiqian Ma , Lifeng Lai

The Reeb graph of a scalar function defined on a domain gives a topologically meaningful summary of that domain. Reeb graphs have been shown in the past decade to be of great importance in geometric processing, image processing, computer…

Computational Geometry · Computer Science 2020-10-13 Mustafa Hajij , Paul Rosen

A geometric graph is a combinatorial graph, endowed with a geometry that is inherited from its embedding in a Euclidean space. Formulation of a meaningful measure of (dis-)similarity in both the combinatorial and geometric structures of two…

Computational Geometry · Computer Science 2022-09-27 Sushovan Majhi , Carola Wenk

Reeb graphs provide a method for studying the shape of a manifold by encoding the evolution and arrangement of level sets of a simple Morse function defined on the manifold. Since their introduction in computer graphics they have been…

Computational Geometry · Computer Science 2010-03-25 Barbara Di Fabio , Claudia Landi

Motivated by persistent homology and topological data analysis, we consider formal sums on a metric space with a distinguished subset. These formal sums, which we call persistence diagrams, have a canonical 1-parameter family of metrics…

Algebraic Topology · Mathematics 2025-02-19 Peter Bubenik , Iryna Hartsock

Distance measures between graphs are important primitives for a variety of learning tasks. In this work, we describe an unsupervised, optimal transport based approach to define a distance between graphs. Our idea is to derive…

Computational Engineering, Finance, and Science · Computer Science 2024-04-11 Michael Scholkemper , Damin Kühn , Gerion Nabbefeld , Simon Musall , Björn Kampa , Michael T. Schaub

An important problem in the field of Topological Data Analysis is defining topological summaries which can be combined with traditional data analytic tools. In recent work Bubenik introduced the persistence landscape, a stable…

Algebraic Topology · Mathematics 2018-12-27 Oliver Vipond

Topological phases are generally characterized by topological invariants denoted by integer numbers. However, different topological systems often require different topological invariants to measure, such as geometric phases, topological…

Mesoscale and Nanoscale Physics · Physics 2024-05-07 ZhaoXiang Fang , Ming Gong , Guang-Can Guo , Yongxu Fu , Long Xiong

Persistence diagrams are important descriptors in Topological Data Analysis. Due to the nonlinearity of the space of persistence diagrams equipped with their {\em diagram distances}, most of the recent attempts at using persistence diagrams…

Machine Learning · Computer Science 2019-08-09 Mathieu Carriere , Ulrich Bauer

Gromov-Hausdorff distances measure shape difference between the objects representable as compact metric spaces, e.g. point clouds, manifolds, or graphs. Computing any Gromov-Hausdorff distance is equivalent to solving an NP-Hard…

Computational Geometry · Computer Science 2024-06-07 Vladyslav Oles , Nathan Lemons , Alexander Panchenko

In this paper, we leverage the properties of non-Euclidean Geometry to define the Geodesic distance (GD) on the space of statistical manifolds. The Geodesic distance is a real and intuitive similarity measure that is a good alternative to…

Computer Vision and Pattern Recognition · Computer Science 2021-06-29 Zakariae Abbad , Ahmed Drissi El Maliani , Said Ouatik El Alaoui , Mohammed El Hassouni

Feature tracking in time-varying scalar fields is a fundamental task in scientific computing. Topological descriptors, which summarize important features of data, have proved to be viable tools to facilitate this task. The merge tree is a…

Graphics · Computer Science 2025-10-14 Son Le Thanh , Tino Weinkauf

We study the probabilistic convergence between the mapper graph and the Reeb graph of a topological space $\mathbb{X}$ equipped with a continuous function $f: \mathbb{X} \rightarrow \mathbb{R}$. We first give a categorification of the…

Algebraic Topology · Mathematics 2020-08-17 Adam Brown , Omer Bobrowski , Elizabeth Munch , Bei Wang

In topological data analysis (TDA), persistence diagrams have been a succesful tool. To compare them, Wasserstein and Bottleneck distances are commonly used. We address the shortcomings of these metrics and show a way to investigate them in…

Computational Geometry · Computer Science 2024-09-27 Paweł Dłotko , Niklas Hellmer

Topological data analysis is an approach to study shape of a data set by means of topology. Its main object of study is the persistence diagram, which represents the topological features of the data set at different spatial resolutions.…

Algebraic Topology · Mathematics 2025-11-05 Azmeer Nordin , Mohd Salmi Md Noorani , Nurulkamal Masseran , Mohd Sabri Ismail , Nur Firyal Roslan

Persistent homology offers a powerful tool for extracting hidden topological signals from brain networks. It captures the evolution of topological structures across multiple scales, known as filtrations, thereby revealing topological…

Motivated by the problem of dealing with incomplete or imprecise acquisition of data in computer vision and computer graphics, we extend results concerning the stability of persistent homology with respect to function perturbations to…

Algebraic Topology · Mathematics 2010-05-11 Patrizio Frosini , Claudia Landi