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Distance measures play an important role in shape classification and data analysis problems. Topological distances based on Reeb graphs and persistence diagrams have been employed to obtain effective algorithms in shape matching and scalar…

Machine Learning · Computer Science 2023-03-07 Yashwanth Ramamurthi , Amit Chattopadhyay

Reeb graphs are a fundamental structure for analyzing the topological and geometric properties of scalar fields. Comparing Reeb graphs is crucial for advancing research in this domain, yet existing metrics are often computationally…

Computational Geometry · Computer Science 2025-07-03 Erin W. Chambers , Guangyu Meng

Searching topological similarity between a pair of shapes or data is an important problem in data analysis and visualization. The problem of computing similarity measures using scalar topology has been studied extensively and proven useful…

Computational Geometry · Computer Science 2020-08-31 Tripti Agarwal , Yashwanth Ramamurthi , Amit Chattopadhyay

A Reeb graph is a graphical representation of a scalar function on a topological space that encodes the topology of the level sets. A Reeb space is a generalization of the Reeb graph to a multiparameter function. In this paper, we propose…

Computational Geometry · Computer Science 2024-10-17 Qingsong Wang , Guanqun Ma , Raghavendra Sridharamurthy , Bei Wang

The Reeb graph is a construction that studies a topological space through the lens of a real valued function. It has widely been used in applications, however its use on real data means that it is desirable and increasingly necessary to…

Algebraic Topology · Mathematics 2015-08-11 Ulrich Bauer , Elizabeth Munch , Yusu Wang

The Reeb graph has been utilized in various applications including the analysis of scalar fields. Recently, research has been focused on using topological signatures such as the Reeb graph to compare multiple scalar fields by defining…

Computational Geometry · Computer Science 2022-10-20 Brian Bollen , Erin Chambers , Joshua A. Levine , Elizabeth Munch

One of the prevailing ideas in geometric and topological data analysis is to provide descriptors that encode useful information about hidden objects from observed data. The Reeb graph is one such descriptor for a given scalar function. The…

Computational Geometry · Computer Science 2016-09-29 Ulrich Bauer , Xiaoyin Ge , Yusu Wang

Persistence diagrams (PD)s play a central role in topological data analysis, and are used in an ever increasing variety of applications. The comparison of PD data requires computing comparison metrics among large sets of PDs, with metrics…

Computational Geometry · Computer Science 2024-02-23 Rolando Kindelan Nuñez , Mircea Petrache , Mauricio Cerda , Nancy Hitschfeld

Merge trees, contour trees, and Reeb graphs are graph-based topological descriptors that capture topological changes of (sub)level sets of scalar fields. Comparing scalar fields using their topological descriptors has many applications in…

Computational Geometry · Computer Science 2023-06-05 Fangfei Lan , Salman Parsa , Bei Wang

Mapper graphs are widely used tools in topological data analysis and visualization. They can be understood as discrete approximations of Reeb graphs, providing insight into the shape and connectivity of complex data. Given a…

Computational Geometry · Computer Science 2026-04-17 Erin Wolf Chambers , Ishika Ghosh , Elizabeth Munch , Sarah Percival , Bei Wang

Topological data analysis is becoming a popular way to study high dimensional feature spaces without any contextual clues or assumptions. This paper concerns itself with one popular topological feature, which is the number of…

Algebraic Topology · Mathematics 2016-05-31 Rushil Anirudh , Vinay Venkataraman , Karthikeyan Natesan Ramamurthy , Pavan Turaga

Metric graphs are ubiquitous in science and engineering. For example, many data are drawn from hidden spaces that are graph-like, such as the cosmic web. A metric graph offers one of the simplest yet still meaningful ways to represent the…

Computational Geometry · Computer Science 2017-12-05 Tamal K. Dey , Dayu Shi , Yusu Wang

Topological Data Analysis methods can be useful for classification and clustering tasks in many different fields as they can provide two dimensional persistence diagrams that summarize important information about the shape of potentially…

Quantum Physics · Physics 2024-09-02 Bernardo Ameneyro , Rebekah Herrman , George Siopsis , Vasileios Maroulas

As graphical summaries for topological spaces and maps, Reeb graphs are common objects in the computer graphics or topological data analysis literature. Defining good metrics between these objects has become an important question for…

Computational Geometry · Computer Science 2017-03-09 Mathieu Carrière , Steve Oudot

Classification of large and dense networks based on topology is very difficult due to the computational challenges of extracting meaningful topological features from real-world networks. In this paper we present a computationally tractable…

Machine Learning · Computer Science 2022-02-04 Tananun Songdechakraiwut , Bryan M. Krause , Matthew I. Banks , Kirill V. Nourski , Barry D. Van Veen

The Reeb space is a fundamental data structure in computational topology that represents the fiber topology of a multi-field (or multiple scalar fields), extending the level set topology of a scalar field. Efficient algorithms have been…

Computational Geometry · Computer Science 2026-02-03 Amit Chattopadhyay , Yashwanth Ramamurthi , Osamu Saeki

Topological Data Analysis (TDA) is an approach to handle with big data by studying its shape. A main tool of TDA is the persistence diagram, and one can use it to compare data sets. One approach to learn on the similarity between two…

Applications · Statistics 2020-03-04 Sarit Agami

Persistence diagrams, an important summary in topological data analysis, consist of a set of ordered pairs, each with positive multiplicity. Persistence diagrams are obtained via Mobius inversion and may be compared using a one-parameter…

Algebraic Topology · Mathematics 2025-02-19 Peter Bubenik , Alex Elchesen

The interleaving distance is arguably the most prominent distance measure in topological data analysis. In this paper, we provide bounds on the computational complexity of determining the interleaving distance in several settings. We show…

Computational Geometry · Computer Science 2018-05-01 Håvard Bakke Bjerkevik , Magnus Bakke Botnan

Since its introduction as a computable approximation of the Reeb graph, the Mapper graph has become one of the most popular tools from topological data analysis for performing data visualization and inference. However, finding an…

Statistics Theory · Mathematics 2025-06-04 Ziyad Oulhaj , Mathieu Carrière , Bertrand Michel
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