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Multi-spectral optoacoustic tomography (MSOT) is an emerging optical imaging method providing multiplex molecular and functional information from the rodent brain. It can be greatly augmented by magnetic resonance imaging (MRI) that offers…

Image and Video Processing · Electrical Eng. & Systems 2021-09-07 Yexing Hu , Berkan Lafci , Artur Luzgin , Hao Wang , Jan Klohs , Xose Luis Dean-Ben , Ruiqing Ni , Daniel Razansky , Wuwei Ren

We present cortical surface parcellation using spherical deep convolutional neural networks. Traditional multi-atlas cortical surface parcellation requires inter-subject surface registration using geometric features with high processing…

Brain shift, i.e. the change in configuration of the brain after opening the dura mater, is a key problem in neuronavigation. We present an approach to co-register intra-operative microscope images with pre-operative MRI to adapt and…

Computer Vision and Pattern Recognition · Computer Science 2013-03-25 Benjamin Berkels , Ivan Cabrilo , Sven Haller , Martin Rumpf , Carlo Schaller

Brightfield and fluorescent imaging of whole brain sections are funda- mental tools of research in mouse brain study. As sectioning and imaging become more efficient, there is an increasing need to automate the post-processing of sec- tions…

Computer Vision and Pattern Recognition · Computer Science 2018-03-12 Yuncong Chen , David Kleinfeld , Martyn Goulding , Yoav Freund

Multitask learning can be effective when features useful in one task are also useful for other tasks, and the group lasso is a standard method for selecting a common subset of features. In this paper, we are interested in a less restrictive…

Machine Learning · Computer Science 2013-11-25 Nikhil Rao , Christopher Cox , Robert Nowak , Timothy Rogers

To transfer knowledge from seen attribute-object compositions to recognize unseen ones, recent compositional zero-shot learning (CZSL) methods mainly discuss the optimal classification branches to identify the elements, leading to the…

Computer Vision and Pattern Recognition · Computer Science 2024-09-02 Fengyuan Dai , Siteng Huang , Min Zhang , Biao Gong , Donglin Wang

An unprecedented amount of existing functional Magnetic Resonance Imaging (fMRI) data provides a new opportunity to understand the relationship between functional fluctuation and human cognition/behavior using a data-driven approach. To…

Machine Learning · Computer Science 2024-09-18 Jiaqi Ding , Tingting Dan , Ziquan Wei , Hyuna Cho , Paul J. Laurienti , Won Hwa Kim , Guorong Wu

This article introduces a predictor-dependent joint modeling framework for network data obtained from multiple subjects over a shared set of nodes with spatial co-ordinates and spatially correlated nodal attributes. The framework is highly…

The success and generalisation of deep learning algorithms heavily depend on learning good feature representations. In medical imaging this entails representing anatomical information, as well as properties related to the specific imaging…

Computer Vision and Pattern Recognition · Computer Science 2020-04-21 Agisilaos Chartsias , Thomas Joyce , Giorgos Papanastasiou , Scott Semple , Michelle Williams , David Newby , Rohan Dharmakumar , Sotirios A. Tsaftaris

We propose the first joint-task learning framework for brain and vessel segmentation (JoB-VS) from Time-of-Flight Magnetic Resonance images. Unlike state-of-the-art vessel segmentation methods, our approach avoids the pre-processing step of…

Image and Video Processing · Electrical Eng. & Systems 2023-04-18 Natalia Valderrama , Ioannis Pitsiorlas , Luisa Vargas , Pablo Arbeláez , Maria A. Zuluaga

Soft-tissue deformation remains a major limitation in image-guided neurosurgery, where intra-operative anatomy can deviate substantially from pre-operative imaging due to brain shift, compromising navigation accuracy and surgical safety.…

Computer Vision and Pattern Recognition · Computer Science 2026-04-21 Eashrat Jahan Muniya , Gernot Kronreif , Ander Biguri , Wolfgang Birkfellner , Sepideh Hatamikia

Brain surface analysis is essential to neuroscience, however, the complex geometry of the brain cortex hinders computational methods for this task. The difficulty arises from a discrepancy between 3D imaging data, which is represented in…

Computer Vision and Pattern Recognition · Computer Science 2019-11-25 Karthik Gopinath , Christian Desrosiers , Herve Lombaert

Graph contrastive learning has gained significant progress recently. However, existing works have rarely explored non-aligned node-node contrasting. In this paper, we propose a novel graph contrastive learning method named RoSA that focuses…

Machine Learning · Computer Science 2022-05-03 Yun Zhu , Jianhao Guo , Fei Wu , Siliang Tang

Developing a reliable and practical face recognition system is a long-standing goal in computer vision research. Existing literature suggests that pixel-wise face alignment is the key to achieve high-accuracy face recognition. By assuming a…

Computer Vision and Pattern Recognition · Computer Science 2015-01-21 Yuting Zhang , Kui Jia , Yueming Wang , Gang Pan , Tsung-Han Chan , Yi Ma

Semantic segmentation and stereo matching, respectively analogous to the ventral and dorsal streams in our human brain, are two key components of autonomous driving perception systems. Addressing these two tasks with separate networks is no…

Computer Vision and Pattern Recognition · Computer Science 2025-07-04 Guanfeng Tang , Zhiyuan Wu , Jiahang Li , Ping Zhong , We Ye , Xieyuanli Chen , Huiming Lu , Rui Fan

3D face registration is an important process in which a 3D face model is aligned and mapped to a template face. However, the task of 3D face registration becomes particularly challenging when dealing with partial face data, where only…

Computer Vision and Pattern Recognition · Computer Science 2024-05-17 Yuchen Guo , Hanqun Cao , Lok Ming Lui

We present Neural Congealing -- a zero-shot self-supervised framework for detecting and jointly aligning semantically-common content across a given set of images. Our approach harnesses the power of pre-trained DINO-ViT features to learn:…

Computer Vision and Pattern Recognition · Computer Science 2023-03-07 Dolev Ofri-Amar , Michal Geyer , Yoni Kasten , Tali Dekel

We introduce neural cortical maps, a continuous and compact neural representation for cortical feature maps, as an alternative to traditional discrete structures such as grids and meshes. It can learn from meshes of arbitrary size and…

Computer Vision and Pattern Recognition · Computer Science 2026-01-28 Ines Vati , Pierrick Bourgeat , Rodrigo Santa Cruz , Vincent Dore , Olivier Salvado , Clinton Fookes , Léo Lebrat

Motivated by increasing trends of relating brain images to a clinical outcome of interest, we propose a functional domain selection (FuDoS) method that effectively selects subregions of the brain associated with the outcome. View each…

Applications · Statistics 2016-06-08 Ah Yeon Park , John A. D. Aston , Frederic Ferraty

The growing popularity of robotic minimally invasive surgeries has made deep learning-based surgical training a key area of research. A thorough understanding of the surgical scene components is crucial, which semantic segmentation models…

Image and Video Processing · Electrical Eng. & Systems 2025-10-31 Muraam Abdel-Ghani , Mahmoud Ali , Mohamed Ali , Fatmaelzahraa Ahmed , Muhammad Arsalan , Abdulaziz Al-Ali , Shidin Balakrishnan