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In this paper we introduce a general framework for casting fully dynamic transitive closure into the problem of reevaluating polynomials over matrices. With this technique, we improve the best known bounds for fully dynamic transitive…

Data Structures and Algorithms · Computer Science 2007-05-23 Camil Demetrescu , Giuseppe F. Italiano

Persistence diagrams are important tools in the field of topological data analysis that describe the presence and magnitude of features in a filtered topological space. However, current approaches for comparing a persistence diagram to a…

Computational Geometry · Computer Science 2021-03-24 Brittany Terese Fasy , Xiaozhou He , Zhihui Liu , Samuel Micka , David L. Millman , Binhai Zhu

In this paper we consider the fundamental problem of approximating the diameter $D$ of directed or undirected graphs. In a seminal paper, Aingworth, Chekuri, Indyk and Motwani [SIAM J. Comput. 1999] presented an algorithm that computes in…

Data Structures and Algorithms · Computer Science 2012-07-17 Liam Roditty , Virginia Vassilevska Williams

Graphs have been widely used in many applications such as social networks, collaboration networks, and biological networks. One important graph analytics is to explore cohesive subgraphs in a large graph. Among several cohesive subgraphs…

Databases · Computer Science 2016-10-19 Yikai Zhang , Jeffrey Xu Yu , Ying Zhang , Lu Qin

We provide a data structure for maintaining an embedding of a graph on a surface (represented combinatorially by a permutation of edges around each vertex) and computing generators of the fundamental group of the surface, in amortized time…

Data Structures and Algorithms · Computer Science 2007-05-23 David Eppstein

We present an $\tilde O(m+n^{1.5})$-time randomized algorithm for maximum cardinality bipartite matching and related problems (e.g. transshipment, negative-weight shortest paths, and optimal transport) on $m$-edge, $n$-node graphs. For…

Data Structures and Algorithms · Computer Science 2021-10-15 Jan van den Brand , Yin-Tat Lee , Danupon Nanongkai , Richard Peng , Thatchaphol Saranurak , Aaron Sidford , Zhao Song , Di Wang

Time series are ubiquitous in domains ranging from medicine to marketing and finance. Frequent Pattern Mining (FPM) from a time series has thus received much attention. Recently, it has been studied under the order-preserving (OP) matching…

Data Structures and Algorithms · Computer Science 2024-12-02 Ling Li , Wiktor Zuba , Grigorios Loukides , Solon P. Pissis , Maria Matsangidou

Vines and vineyard connecting a stack of persistence diagrams have been introduced in the non-zigzag setting by Cohen-Steiner et al. We consider computing these vines over changing filtrations for zigzag persistence while incorporating two…

Computational Geometry · Computer Science 2024-02-20 Tamal K. Dey , Tao Hou

It is widely assumed that $O(m+\lg \sigma)$ is the best one can do for finding a pattern of length $m$ in a compacted trie storing strings over an alphabet of size $\sigma$, if one insists on linear-size data structures and deterministic…

Data Structures and Algorithms · Computer Science 2013-02-15 Johannes Fischer , Pawel Gawrychowski

We give an algorithm for computing exact maximum flows on graphs with $m$ edges and integer capacities in the range $[1, U]$ in $\widetilde{O}(m^{\frac{3}{2} - \frac{1}{328}} \log U)$ time. For sparse graphs with polynomially bounded…

Data Structures and Algorithms · Computer Science 2021-06-11 Yu Gao , Yang P. Liu , Richard Peng

Graphlet counting is an important problem as it has numerous applications in several fields, including social network analysis, biological network analysis, transaction network analysis, etc. Most of the practical networks are dynamic. A…

Data Structures and Algorithms · Computer Science 2023-08-29 Hriday G , Pranav Saikiran Sista , Apurba Das

Large-scale graphs are widely used to represent object relationships in many real world applications. The occurrence of large-scale graphs presents significant computational challenges to process, analyze, and extract information. Graph…

Social and Information Networks · Computer Science 2019-10-11 Yu Jin , Andreas Loukas , Joseph F. JaJa

A cut sparsifier is a reweighted subgraph that maintains the weights of the cuts of the original graph up to a multiplicative factor of $(1\pm\epsilon)$. This paper considers computing cut sparsifiers of weighted graphs of size $O(n\log…

Data Structures and Algorithms · Computer Science 2022-04-29 Sebastian Forster , Tijn de Vos

Vizing's theorem states that every graph $G$ of maximum degree $\Delta$ can be properly edge-colored using $\Delta + 1$ colors. The fastest currently known $(\Delta+1)$-edge-coloring algorithm for general graphs is due to Sinnamon and runs…

Data Structures and Algorithms · Computer Science 2025-08-06 Anton Bernshteyn , Abhishek Dhawan

We provide an algorithm that, given an $n$-vertex $m$-edge Eulerian graph with polynomially bounded weights, computes an $\breve{O}(n\log^{2} n \cdot \varepsilon^{-2})$-edge $\varepsilon$-approximate Eulerian sparsifier with high…

Data Structures and Algorithms · Computer Science 2024-08-20 Arun Jambulapati , Sushant Sachdeva , Aaron Sidford , Kevin Tian , Yibin Zhao

An occurrence of a repeated substring $u$ in a string $S$ is called a net occurrence if extending the occurrence to the left or to the right decreases the number of occurrences to 1. The net frequency (NF) of a repeated substring $u$ in a…

Data Structures and Algorithms · Computer Science 2026-01-01 Shunsuke Inenaga

We study a generalization of the recently introduced order-preserving pattern matching, where instead of looking for an exact copy of the pattern, we only require that the relative order between the elements is the same. In our variant, we…

Data Structures and Algorithms · Computer Science 2014-03-07 Pawel Gawrychowski , Przemyslaw Uznanski

We consider the problem of detecting a cycle in a directed graph that grows by arc insertions, and the related problems of maintaining a topological order and the strong components of such a graph. For these problems, we give two…

Data Structures and Algorithms · Computer Science 2011-12-06 Michael A. Bender , Jeremy T. Fineman , Seth Gilbert , Robert E. Tarjan

We present two on-line algorithms for maintaining a topological order of a directed $n$-vertex acyclic graph as arcs are added, and detecting a cycle when one is created. Our first algorithm handles $m$ arc additions in $O(m^{3/2})$ time.…

Data Structures and Algorithms · Computer Science 2011-05-13 Bernhard Haeupler , Telikepalli Kavitha , Rogers Mathew , Siddhartha Sen , Robert Endre Tarjan

Duality results connecting persistence modules for absolute and relative homology provides a fundamental understanding into persistence theory. In this paper, we study similar associations in the context of zigzag persistence. Our main…

Computational Geometry · Computer Science 2021-10-14 Tamal K. Dey , Tao Hou
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