Related papers: Discrepancies of subtrees
Finding the set of leaves for an unbounded tree is a nontrivial process in both the Weihrauch and reverse mathematics settings. Despite this, many combinatorial principles for trees are equivalent to their restrictions to trees with leaf…
Deciding whether there is a single tree -a supertree- that summarizes the evolutionary information in a collection of unrooted trees is a fundamental problem in phylogenetics. We consider two versions of this question: agreement and…
We show that there exists a constant $c>0$ such that every $n$-vertex tree $T$ with $\Delta(T)\le cn$ has Ramsey number $R(T)=\max\{t_1+2t_2,2t_1\}-1$, where $t_1\ge t_2$ are the sizes of the bipartition classes of $T$. This improves an…
We look for partition theorems for large subtrees for suitable uncountable trees and colourings. We concentrate on sub-trees of $^{\kappa \ge} 2$ expanded by a well ordering of each level. Unlike earlier works, we do not ask the embedding…
Leaves, i.e., vertices of degree one, can play a significant role in graph structure, especially in sparsely connected settings in which leaves often constitute the largest fraction of vertices. We consider a leaf-based counterpart of the…
The Horton-Strahler (HS) index $r=\max{(i,j)}+\delta_{i,j}$ has been shown to be relevant to a number of physical (such at diffusion limited aggregation) geological (river networks), biological (pulmonary arteries, blood vessels, various…
We prove that finding a rooted subtree with at least $k$ leaves in a digraph is a fixed parameter tractable problem. A similar result holds for finding rooted spanning trees with many leaves in digraphs from a wide family $\cal L$ that…
We prove that every oriented tree on $n$ vertices with bounded maximum degree appears as a spanning subdigraph of every directed graph on $n$ vertices with minimum semidegree at least $n/2+o(n)$. This can be seen as a directed graph…
Pairwise ordered tree alignment are combinatorial objects that appear in RNA secondary structure comparison. However, the usual representation of tree alignments as supertrees is ambiguous, i.e. two distinct supertrees may induce identical…
A nonrepetitive coloring of a path is a coloring of its vertices such that the sequence of colors along the path does not contain two identical, consecutive blocks. The remarkable construction of Thue asserts that 3 colors are enough to…
Let $\mathcal {T}^{\Delta}_n$ denote the set of trees of order $n$, in which the degree of each vertex is bounded by some integer $\Delta$. Suppose that every tree in $\mathcal {T}^{\Delta}_n$ is equally likely. For any given subtree $H$,…
Multi-edge trees as introduced in a recent paper of Dziemia\'nczuk are plane trees where multiple edges are allowed. We first show that $d$-ary multi-edge trees where the out-degrees are bounded by $d$ are in bijection with classical…
An equitable tree-$k$-coloring of a graph is a vertex $k$-coloring such that each color class induces a forest and the size of any two color classes differ by at most one. In this work, we show that every interval graph $G$ has an equitable…
A rainbow spanning tree in an edge-colored graph is a spanning tree in which each edge is a different color. Carraher, Hartke, and Horn showed that for $n$ and $C$ large enough, if $G$ is an edge-colored copy of $K_n$ in which each color…
We consider random binary trees that appear as the output of certain standard algorithms for sorting and searching if the input is random. We introduce the subtree size metric on search trees and show that the resulting metric spaces…
Let $G = (V,E)$ denote a simple graph with the vertex set $V$ and the edge set $E$. The profile of a vertex set $V'\subseteq V$ denotes the multiset of pairwise distances between the vertices of $V'$. Two disjoint subsets of $V$ are…
In this paper, we consider a tree inference problem motivated by the critical problem in single-cell genomics of reconstructing dynamic cellular processes from sequencing data. In particular, given a population of cells sampled from such a…
We consider special cases of the two tree degree sequences problem. We show that if two tree degree sequences do not have common leaves then they always have edge-disjoint caterpillar realizations. By using a probabilistic method, we prove…
Rotation distances measure the differences in structure between rooted ordered binary trees. The one-dimensional skeleta of associahedra are rotation graphs, where two vertices representing trees are connected by an edge if they differ by a…
We establish maximal trees and graphs for the difference of average distance and proximity proving thus the corresponding conjecture posed in [4]. We also establish maximal trees for the difference of average eccentricity and remoteness and…