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According to Jerne's idiotypic network hypothesis, the adaptive immune system is regulated by interactions between the variable regions of antibodies, B cells, and T cells.1 The symmetrical immune network theory2,3 is based on Jerne's…

Cell Behavior · Quantitative Biology 2014-03-07 Earnest Leung , Geoffrey W. Hoffmann

The evolution of the adaptive immune system is characterized by changes in the relative abundances of the B- and T-cell clones that make up its repertoires. To fully capture this evolution, we need to describe the complex dynamics of the…

Populations and Evolution · Quantitative Biology 2017-03-02 Jonathan Desponds , Andreas Mayer , Thierry Mora , Aleksandra M. Walczak

This study examines the potential causal relationship between head injury and the risk of developing Alzheimer's disease (AD) using Bayesian networks and regression models. Using a dataset of 2,149 patients, we analyze key medical history…

Machine Learning · Computer Science 2025-02-19 Andrei Lixandru

Mixture-of-Experts (MoE) architectures decouple model capacity from per-token computation, enabling scaling beyond the computational limits imposed by dense scaling laws. Yet how MoE architectures shape knowledge acquisition during…

Artificial Intelligence · Computer Science 2026-01-14 Bo Wang , Junzhuo Li , Hong Chen , Yuanlin Chu , Yuxuan Fan , Xuming Hu

We present an epidemiological model for vector-borne diseases that includes within-host viral load and antibody dynamics using structured transport equations. By incorporating the internal dynamics into the infected and recovered host…

Analysis of PDEs · Mathematics 2026-05-26 Paulo Amorim , Maria Soledad Aronna , Debora de Oliveira Medeiros

Immunological memory is a fundamental theory of modern immunology, which is traditionally believed to be mediated only by B and T lymphocytes that recognize antigen epitopes in a receptor-restricted manner. During the last decade data…

Cell Behavior · Quantitative Biology 2023-09-27 Yiqiang Wang

Recurrent exacerbations remain a common yet preventable outcome for many children with asthma. Machine learning (ML) algorithms using electronic medical records (EMR) could allow accurate identification of children at risk for exacerbations…

Variational Autoencoders (VAEs) suffer from degenerated performance, when learning several successive tasks. This is caused by catastrophic forgetting. In order to address the knowledge loss, VAEs are using either Generative Replay (GR)…

Machine Learning · Computer Science 2021-12-17 Fei Ye , Adrian G. Bors

Continual learning, the ability of a model to learn over time without forgetting previous knowledge and, therefore, be adaptive to new data, is paramount in dynamic fields such as disease outbreak prediction. Deep neural networks, i.e.,…

Machine Learning · Computer Science 2024-01-18 Saba Aslam , Abdur Rasool , Hongyan Wu , Xiaoli Li

The Guard-Guardee model for plant immunity describes how resistance proteins (guards) in host cells monitor host target proteins (guardees) that are manipulated by pathogen effector proteins. A recently suggested extension of this model…

Populations and Evolution · Quantitative Biology 2017-02-07 Iaroslav Ispolatov , Michael Doebeli

Disease risk prediction has attracted increasing attention in the field of modern healthcare, especially with the latest advances in artificial intelligence (AI). Electronic health records (EHRs), which contain heterogeneous patient…

Artificial Intelligence · Computer Science 2022-01-19 Shuai Niu , Qing Yin , Yunya Song , Yike Guo , Xian Yang

Human Object Interaction (HOI) detection aims to localize and infer the relationships between a human and an object. Arguably, training supervised models for this task from scratch presents challenges due to the performance drop over rare…

Computer Vision and Pattern Recognition · Computer Science 2023-09-08 Ting Lei , Fabian Caba , Qingchao Chen , Hailin Jin , Yuxin Peng , Yang Liu

Drug-drug interaction event (DDIE) prediction is crucial for preventing adverse reactions and ensuring optimal therapeutic outcomes. However, existing methods often face challenges with imbalanced datasets, complex interaction mechanisms,…

Machine Learning · Computer Science 2026-03-16 Pengfei Liu , Jun Tao , Zhixiang Ren

The expression of mental health symptoms through non-traditional means, such as memes, has gained remarkable attention over the past few years, with users often highlighting their mental health struggles through figurative intricacies…

We study the emergence of the collective spatio-temporal macroscopic properties of the immune system, by representing individually the elementary interactions between its microscopic components (antibodies, antigens, cytokines). The results…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Yoram Louzoun , Sorin Solomon , Henri Atlan , Irun. R. Cohen

We propose a model of the immunity to a cyclical epidemic disease taking account not only of seasonal boosts during the infectious season, but also of residual immunity remaining from one season to the next. The focus is on the exponential…

Populations and Evolution · Quantitative Biology 2024-04-22 Siyu Chen , David Sankoff

With large language models (LLMs) demonstrating remarkable capabilities, there has been a surge in research on leveraging LLMs to build general-purpose multi-modal agents. However, existing approaches either rely on computationally…

Artificial Intelligence · Computer Science 2025-05-29 Changze Qiao , Mingming Lu

The recent COVID-19 pandemic has led to an increasing interest in the modeling and analysis of infectious diseases. The pandemic has made a significant impact on the way we behave and interact in our daily life. The past year has witnessed…

Computer Science and Game Theory · Computer Science 2021-06-17 Shutian Liu , Yuhan Zhao , Quanyan Zhu

We study an individual-based stochastic epidemic model in which infected individuals become susceptible again following each infection. In contrast to classical compartment models, after each infection, the infectivity is a random function…

Probability · Mathematics 2025-04-29 Raphaël Forien , Guodong Pang , Étienne Pardoux , Arsene Brice Zotsa-Ngoufack

Human behaviour strongly influences the spread of infectious diseases: understanding the interplay between epidemic dynamics and adaptive behaviours is essential to improve response strategies to epidemics, with the goal of containing the…

Physics and Society · Physics 2024-08-21 Marco Mancastroppa , Alessandro Vezzani , Vittoria Colizza , Raffaella Burioni