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Related papers: When does humoral memory enhance infection?

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Albeit epidemic models have evolved into powerful predictive tools for the spread of diseases and opinions, most assume memoryless agents and independent transmission channels. We develop an infection mechanism that is endowed with memory…

Physics and Society · Physics 2019-05-22 Xavier R. Hoffmann , Marián Boguñá

The cellular adaptive immune response plays a key role in resolving influenza infection. Experiments where individuals are successively infected with different strains within a short timeframe provide insight into the underlying viral…

Populations and Evolution · Quantitative Biology 2016-11-24 Ada W. C. Yan , Pengxing Cao , Jane M. Heffernan , Jodie McVernon , Kylie M. Quinn , Nicole L. La Gruta , Karen L. Laurie , James M. McCaw

The interplay between the virus, infected cells and the immune responses to SARS-CoV-2 is still under debate. Extending the basic model of viral dynamics we propose here a formal approach to describe the neutralizing versus weakly (or…

Dynamical Systems · Mathematics 2022-07-08 Antoine Danchin , Oriane Pagani-Azizi , Gabriel Turinici , Ghozlane Yahiaoui

Infection by distinct Dengue virus serotypes and host immunity are intricately linked. In particular, certain levels of cross-reactive antibodies in the host may actually enhance infection severity leading to Dengue hemorrhagic fever (DHF).…

Populations and Evolution · Quantitative Biology 2019-12-19 Hayriye Gulbudak , Cameron J. Browne

Memory has a great impact on the evolution of every process related to human societies. Among them, the evolution of an epidemic is directly related to the individuals' experiences. Indeed, any real epidemic process is clearly sustained by…

Physics and Society · Physics 2017-03-10 M. Saeedian , M. Khalighi , N. Azimi-Tafreshi , G. R. Jafari , M. Ausloos

This paper examines the interplay of the effect of cross immunity and antibody-dependent enhancement (ADE) in mutistrain diseases. Motivated by dengue fever, we study a model for the spreading of epidemics in a population with multistrain…

Populations and Evolution · Quantitative Biology 2015-05-13 Simone Bianco , Leah B. Shaw , Ira B. Schwartz

Dengue viral infections show unique infection patterns arising from its four serot- ypes, (DENV-1,2,3,4). Its effects range from simple fever in primary infections to potentially fatal secondary infections. We analytically and numerically…

Adaptation and Self-Organizing Systems · Physics 2013-06-12 Tanvi P. Gujarati , G. Ambika

Viral infections trigger complex immune responses with heterogeneous outcomes shaped by nonlinear feedbacks. An ordinary differential equation model is developed to investigate immune response dynamics during viral infection, incorporating…

Quantitative Methods · Quantitative Biology 2025-10-08 Xiaoxin Wang , Kai Kang , Leyi Zhang , Changjing Zhuge

How does immune system evolve functional proteins - potent antibodies - in such a short time? We address this question using a microscopic, protein-level, sequence-based model of humoral immune response with explicitly defined interactions…

Cell Behavior · Quantitative Biology 2008-05-27 Muyoung Heo , Konstantin B. Zeldovich , Eugene I. Shakhnovich

The adaptive immune system provides a diverse set of molecules that can mount specific responses against a multitude of pathogens. Memory is a key feature of adaptive immunity, which allows organisms to respond more readily upon…

Populations and Evolution · Quantitative Biology 2021-04-14 Oskar H Schnaack , Armita Nourmohammad

An adaptive agent predicting the future state of an environment must weigh trust in new observations against prior experiences. In this light, we propose a view of the adaptive immune system as a dynamic Bayesian machinery that updates its…

Populations and Evolution · Quantitative Biology 2019-05-14 Andreas Mayer , Vijay Balasubramanian , Aleksandra M. Walczak , Thierry Mora

We study how the interplay between the memory immune response and pathogen mutation affects epidemic dynamics in two related models. The first explicitly models pathogen mutation and individual memory immune responses, with contacted…

Chaotic Dynamics · Physics 2009-11-07 Michelle Girvan , Duncan S. Callaway , M. E. J. Newman , Steven H. Strogatz

Antibodies play an essential role in the immune response to viral infections, vaccination, or antibody therapy. Nevertheless, they can be either protective or harmful during the immune response. Moreover, competition or cooperation between…

Quantitative Methods · Quantitative Biology 2024-10-21 Charlotte Dugourd-Camus , Claudia P. Ferreira , Mostafa Adimy

Our main purpose is to compare classical nonself-centered, two-signal theoretical models of the adaptive immune system with a novel, self-centered, one-signal model developed by our research group. Our model hypothesizes that the immune…

Molecular Networks · Quantitative Biology 2020-12-02 Tamás Szabados , Csaba Kerepesi , Tibor Bakács

The adaptive immune system relies on diversity of its repertoire of receptors to protect the organism from a great variety of pathogens. Since the initial repertoire is the result of random gene rearrangement, binding of receptors is not…

Cell Behavior · Quantitative Biology 2019-10-30 Alexander Mozeika , Franca Fraternali , Deborah Dunn-Walters , Anthony C. C. Coolen

Risk-driven behavior provides a feedback mechanism through which individuals both shape and are collectively affected by an epidemic. We introduce a general and flexible compartmental model to study the effect of heterogeneity in the…

Many emerging pathogens infect multiple host species, and multi-host pathogens may have very different dynamics in different host species. This research addresses how pathogen replication rates and Immune System (IS) response times are…

Other Quantitative Biology · Quantitative Biology 2009-10-19 Soumya Banerjee , Melanie Moses

The vertebrate adaptive immune system provides a flexible and diverse set of molecules to neutralize pathogens. Yet, viruses such as HIV can cause chronic infections by evolving as quickly as the adaptive immune system, forming an…

Populations and Evolution · Quantitative Biology 2016-06-22 Armita Nourmohammad , Jakub Otwinowski , Joshua B. Plotkin

Immunological systems have been an abundant inspiration to contemporary computer scientists. Problem solving strategies, stemming from known immune system phenomena, have been successfully applied to challenging problems of modern computing…

Cell Behavior · Quantitative Biology 2017-05-24 Alexandre de Castro , Carlos Frederico Fronza , Domingos Alves

Antibodies, an essential part of our immune system, develop through an intricate process to bind a wide array of pathogens. This process involves randomly mutating DNA sequences encoding these antibodies to find variants with improved…

Populations and Evolution · Quantitative Biology 2018-09-24 Jean Feng , David A. Shaw , Vladimir N. Minin , Noah Simon , Frederick A. Matsen
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