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Data integration is considered a classic research field and a pressing need within the information science community. Ontologies play a critical role in such a process by providing well-consolidated support to link and semantically…

Artificial Intelligence · Computer Science 2024-05-30 Inès Osman , Salvatore F. Pileggi , Sadok Ben Yahia

In this work, we consider the exponentially growing subarea of genetics in cancer. The need to synthesize and centralize this evidence for dissemination has motivated a team of physicians to manually construct and maintain a knowledge base…

Computation and Language · Computer Science 2020-05-27 Somin Wadhwa , Kanhua Yin , Kevin S. Hughes , Byron C. Wallace

Adapting large language models (LLMs) to new and diverse knowledge is essential for their lasting effectiveness in real-world applications. This survey provides an overview of state-of-the-art methods for expanding the knowledge of LLMs,…

Computation and Language · Computer Science 2025-02-19 Mingyang Wang , Alisa Stoll , Lukas Lange , Heike Adel , Hinrich Schütze , Jannik Strötgen

A significant challenge in machine learning, particularly in noisy and low-data environments, lies in effectively incorporating inductive biases to enhance data efficiency and robustness. Despite the success of informed machine learning…

Machine Learning · Computer Science 2025-02-06 Katarzyna Kobalczyk , Mihaela van der Schaar

Systems biology seeks to create math models of biological systems to reduce inherent biological complexity and provide predictions for applications such as therapeutic development. However, it remains a challenge to determine which math…

Quantitative Methods · Quantitative Biology 2022-08-05 Vincent D. Zaballa , Elliot E. Hui

In this work we demonstrate how to automate parts of the infectious disease-control policy-making process via performing inference in existing epidemiological models. The kind of inference tasks undertaken include computing the posterior…

Computer simulations have become an important tool across the biomedical sciences and beyond. For many important problems several different models or hypotheses exist and choosing which one best describes reality or observed data is not…

Quantitative Methods · Quantitative Biology 2010-01-20 Tina Toni , Michael P. H. Stumpf

Artificial intelligence (AI) techniques are widely applied in the life sciences. However, applying innovative AI techniques to understand and deconvolute biological complexity is hindered by the learning curve for life science scientists to…

Artificial Intelligence · Computer Science 2024-03-28 Nisha Pillai , Athish Ram Das , Moses Ayoola , Ganga Gireesan , Bindu Nanduri , Mahalingam Ramkumar

The introduction of automated vehicles without permanent human supervision demands a functional system description, including functional system boundaries and a comprehensive safety analysis. These inputs to the technical development can be…

Artificial Intelligence · Computer Science 2018-04-25 Gerrit Bagschik , Till Menzel , Markus Maurer

We describe a question answering model that applies to both images and structured knowledge bases. The model uses natural language strings to automatically assemble neural networks from a collection of composable modules. Parameters for…

Computation and Language · Computer Science 2016-06-09 Jacob Andreas , Marcus Rohrbach , Trevor Darrell , Dan Klein

The objective of this work is to manipulate visual timelines (e.g. a video) through natural language instructions, making complex timeline editing tasks accessible to non-expert or potentially even disabled users. We call this task…

Computer Vision and Pattern Recognition · Computer Science 2024-11-20 Alejandro Pardo , Jui-Hsien Wang , Bernard Ghanem , Josef Sivic , Bryan Russell , Fabian Caba Heilbron

Automated simplification models aim to make input texts more readable. Such methods have the potential to make complex information accessible to a wider audience, e.g., providing access to recent medical literature which might otherwise be…

Computation and Language · Computer Science 2022-04-18 Ashwin Devaraj , William Sheffield , Byron C. Wallace , Junyi Jessy Li

Automated machine learning (AutoML) systems aim to enable training machine learning (ML) models for non-ML experts. A shortcoming of these systems is that when they fail to produce a model with high accuracy, the user has no path to improve…

Machine Learning · Computer Science 2021-02-23 Behnaz Arzani , Kevin Hsieh , Haoxian Chen

In complex inferential tasks like question answering, machine learning models must confront two challenges: the need to implement a compositional reasoning process, and, in many applications, the need for this reasoning process to be…

Computer Vision and Pattern Recognition · Computer Science 2019-03-08 Ronghang Hu , Jacob Andreas , Trevor Darrell , Kate Saenko

Training large, general-purpose language models poses significant challenges. The growing availability of specialized expert models, fine-tuned from pretrained models for specific tasks or domains, offers a promising alternative. Leveraging…

Computation and Language · Computer Science 2025-08-19 William Fleshman , Benjamin Van Durme

Although knowledge bases play an important role in many domains (including in archives, where they are sometimes used for entity extraction and semantic annotation tasks), it is challenging to build knowledge bases by hand. This is owing to…

Information Retrieval · Computer Science 2021-02-08 Osman Din

The goal of the paper is to automatize the selection of mechanisms which are able to describe a set of measurements. In order to do so first we construct a set of possible mechanism fulfilling chemically reasonable requirements with a given…

Numerical Analysis · Mathematics 2019-04-03 Tibor Nagy , János Tóth , Tamás Ladics

We describe an augmented intelligence system for simplifying and enhancing the modeling experience for operations research. Using this system, the user receives a suggested formulation of an optimization problem based on its description. To…

Computation and Language · Computer Science 2022-10-13 Rindranirina Ramamonjison , Haley Li , Timothy T. Yu , Shiqi He , Vishnu Rengan , Amin Banitalebi-Dehkordi , Zirui Zhou , Yong Zhang

Feature modeling is a widely used formalism to characterize a set of products (also called configurations). As a manual elaboration is a long and arduous task, numerous techniques have been proposed to reverse engineer feature models from…

Software Engineering · Computer Science 2015-02-17 Guillaume Bécan , Razieh Behjati , Arnaud Gotlieb , Mathieu Acher

Question Answering (QA) is key for making possible a robust communication between human and machine. Modern language models used for QA have surpassed the human-performance in several essential tasks; however, these models require large…

Computation and Language · Computer Science 2021-09-08 Liubov Nikolenko , Pouya Rezazadeh Kalehbasti
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