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Building biological models by inferring functional dependencies from experimental data is an im- portant issue in Molecular Biology. To relieve the biologist from this traditionally manual process, various approaches have been proposed to…

Machine Learning · Computer Science 2011-07-29 Max Ostrowski , Torsten Schaub , Markus Durzinsky , Wolfgang Marwan , Annegret Wagler

Compiling commonsense knowledge is traditionally an AI topic approached by manual labor. Recent advances in web data processing have enabled automated approaches. In this demonstration we will showcase three systems for automated…

Artificial Intelligence · Computer Science 2021-05-06 Simon Razniewski

Molecular dynamics simulations hold great promise for providing insight into the microscopic behavior of complex molecular systems. However, their effectiveness is often constrained by long timescales associated with rare events. Enhanced…

Computational Physics · Physics 2026-03-03 Kai Zhu , Enrico Trizio , Jintu Zhang , Renling Hu , Linlong Jiang , Tingjun Hou , Luigi Bonati

Current research in biology heavily depends on the availability and efficient use of information. In order to build new knowledge, various sources of biological data must often be combined. Semantic Web technologies, which provide a common…

Quantitative Methods · Quantitative Biology 2009-02-19 Claude Pasquier

Although many AI applications of interest require specialized multi-modal models, relevant data to train such models is inherently scarce or inaccessible. Filling these gaps with human annotators is prohibitively expensive, error-prone, and…

Artificial Intelligence · Computer Science 2026-04-01 Tim R. Davidson , Benoit Seguin , Enrico Bacis , Cesar Ilharco , Hamza Harkous

Autonomous systems control many tasks in our daily lives. To increase trust in those systems and safety of the interaction between humans and autonomous systems, the system behaviour and reasons for autonomous decision should be explained…

Software Engineering · Computer Science 2022-09-29 Maike Schwammberger , Verena Klös

The Agent Based Model community has a rich and diverse ecosystem of libraries, platforms, and applications to help modelers develop rigorous simulations. Despite this robust and diverse ecosystem, the complexity of life from microbial…

Computers and Society · Computer Science 2021-11-16 Thomas Pike , Samantha Golden , Daniel Lowdermilk , Brandon Luong , Benjamin Rosado

Sentiment-aware intelligent systems are essential to a wide array of applications. These systems are driven by language models which broadly fall into two paradigms: Lexicon-based and contextual. Although recent contextual models are…

Text generation system has made massive promising progress contributed by deep learning techniques and has been widely applied in our life. However, existing end-to-end neural models suffer from the problem of tending to generate…

Artificial Intelligence · Computer Science 2020-03-03 Hao Wang , Bin Guo , Wei Wu , Zhiwen Yu

Many automated system analysis techniques (e.g., model checking, model-based testing) rely on first obtaining a model of the system under analysis. System modeling is often done manually, which is often considered as a hindrance to adopt…

Software Engineering · Computer Science 2019-11-22 Jingyi Wang , Jun Sun , Qixia Yuan , Jun Pang

The process of preparing potentially large and complex data sets for further analysis or manual examination is often called data wrangling. In classical warehousing environments, the steps in such a process have been carried out using…

Model-based testing relies on behavior models for the generation of model traces: input and expected output---test cases---for an implementation. We use the case study of an automotive network controller to assess different test suites in…

Biological data and knowledge bases increasingly rely on Semantic Web technologies and the use of knowledge graphs for data integration, retrieval and federated queries. We propose a solution for automatically semantifying biological…

Artificial Intelligence · Computer Science 2021-12-03 Marco Anteghini , Jennifer D'Souza , Vitor A. P. Martins dos Santos , Sören Auer

Simulation models are an absolute necessity in the human and social sciences, which can only very exceptionally use experimental science methods to construct their knowledge. Models enable the simulation of social processes by replacing the…

Computers and Society · Computer Science 2020-01-06 J. Raimbault , D. Pumain

Automated Machine Learning (AutoML) is an area of research that focuses on developing methods to generate machine learning models automatically. The idea of being able to build machine learning models with very little human intervention…

Machine Learning · Computer Science 2023-08-31 Hernan Ceferino Vazquez

We consider the basic features of complex dynamical and control systems. Special attention is paid to the problems of synthesis of dynamical models of complex systems, construction of efficient control models, and to the development of…

Computational Engineering, Finance, and Science · Computer Science 2009-07-03 Armen Bagdasaryan

Automation of machine learning model development is increasingly becoming an established research area. While automated model selection and automated data pre-processing have been studied in depth, there is, however, a gap concerning…

Machine Learning · Computer Science 2021-06-08 Rashid Bakirov , Bogdan Gabrys , Damien Fay

Modern language model-based AI systems are remarkably powerful, yet their capabilities remain fundamentally capped by their human creators in three key ways. First, although a model's weights can be updated via fine-tuning, acquiring new…

Artificial Intelligence · Computer Science 2026-03-20 Zitong Yang

This paper proposes a knowledge-based legal document assembly method that uses a machine-readable representation of knowledge of legal professionals. This knowledgebase has two components - the formal knowledge of legal norms represented as…

Software Engineering · Computer Science 2020-09-15 Marko Marković , Stevan Gostojić

With the tremendous increase in the amount of biological literature, developing automated methods for extracting big data from papers, building models and explaining big mechanisms becomes a necessity. We describe here our approach to…

Molecular Networks · Quantitative Biology 2017-06-14 Khaled Sayed , Cheryl A. Telmer , Adam A. Butchy , Natasa Miskov-Zivanov