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Protein-Protein Interaction Networks aim to model the interactome, providing a powerful tool for understanding the complex relationships governing cellular processes. These networks have numerous applications, including functional…

Molecular Networks · Quantitative Biology 2023-10-05 Rodrigo Henrique Ramos , Cynthia de Oliveira Lage Ferreira , Adenilso Simao

Many systems in nature, from ferromagnets to flocks of birds, exhibit ordering phenomena on the large scale. In physical systems order is statistically robust for large enough dimensions, with relative fluctuations due to noise vanishing…

Statistical Mechanics · Physics 2017-04-05 Andrea Cavagna , Irene Giardina , Asja Jelic , Edmondo Silvestri , Massimiliano Viale

There are many natural, physical, and biological systems that exhibit multiple time scales. For example, the dynamics of a population of ticks can be described in continuous time during their individual life cycle yet discrete time is used…

Dynamical Systems · Mathematics 2009-07-10 Raquel M. Lopez , Sergei K. Suslov , Erika T. Camacho

The human connectome has been widely studied over the past decade. A principal finding is that it can be decomposed into communities of densely interconnected brain regions. This result, however, may be limited methodologically. Past…

Trophic coherence, a measure of the extent to which the nodes of a directed network are organised in levels, has recently been shown to be closely related to many structural and dynamical aspects of complex systems, including graph…

Physics and Society · Physics 2016-07-22 Janis Klaise , Samuel Johnson

Swarm Intelligence (SI) is the property of a system whereby the collective behaviors of (unsophisticated) entities interacting locally with their environment cause coherent functional global patterns to emerge. SI provides a basis with…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Vitorino Ramos , Carlos Fernandes , Agostinho C. Rosa

To learn how cognition is implemented in the brain, we must build computational models that can perform cognitive tasks, and test such models with brain and behavioral experiments. Cognitive science has developed computational models of…

Neurons and Cognition · Quantitative Biology 2018-08-01 Nikolaus Kriegeskorte , Pamela K. Douglas

This study is the first to clearly identify the functions required to construct artificial entities capable of behaving autonomously like humans, and organizes them into a three-layer functional hierarchy. Specifically, it defines three…

Artificial Intelligence · Computer Science 2025-06-17 Kazunori D Yamada

This article proposes a research and development direction that would lead to the creation of next-generation intelligent technical systems. A distinctive feature of these systems is their ability to undergo evolutionary change. Cognitive…

Neurons and Cognition · Quantitative Biology 2026-01-12 Alexander Serov

Swarm intelligence is the collective behavior emerging in systems with locally interacting components. Because of their self-organization capabilities, swarm-based systems show essential properties for handling real-world problems such as…

Neural and Evolutionary Computing · Computer Science 2019-11-13 Marcos Oliveira , Diego Pinheiro , Mariana Macedo , Carmelo Bastos-Filho , Ronaldo Menezes

We assess electrical brain dynamics before, during, and after one-hundred human epileptic seizures with different anatomical onset locations by statistical and spectral properties of functionally defined networks. We observe a concave-like…

Neurons and Cognition · Quantitative Biology 2013-11-25 Kaspar A. Schindler , Stephan Bialonski , Marie-Therese Horstmann , Christian E. Elger , Klaus Lehnertz

To understand the structure and organization of a large-scale social, biological or technological network, it can be helpful to describe and extract local communities or modules of the network. In this article, we develop a neurodynamic…

Social and Information Networks · Computer Science 2015-12-01 Shihua Zhang , Guanghua Hu , Wenwen Min

The nervous system of the nematode soil worm Caenorhabditis elegans exhibits remarkable complexity despite the worm's small size. A general challenge is to better understand the relationship between neural organization and neural activity…

Neurons and Cognition · Quantitative Biology 2020-10-30 Alejandro Morales , Tom Froese

Human brain contains about 10 billion neurons, each of which has about 10~10,000 nerve endings from which neurotransmitters are released in response to incoming spikes, and the released neurotransmitters then bind to receptors located in…

Neurons and Cognition · Quantitative Biology 2012-03-06 Xuejuan Zhang , Jianfeng Feng

Independent from the still ongoing research in measuring individual intelligence, we anticipate and provide a framework for measuring collective intelligence. Collective intelligence refers to the idea that several individuals can…

Artificial Intelligence · Computer Science 2013-07-01 Michel Halmes

Coexistence of individuals with different species or phenotypes is often found in nature in spite of competition between them. Stable coexistence of multiple types of individuals have implications for maintenance of ecological biodiversity…

Disordered Systems and Neural Networks · Physics 2007-05-23 Naoki Masuda , Norio Konno

The underlying physiological mechanisms of generating conscious states are still unknown. To make progress on the problem of consciousness, we will need to experimentally design a system that evolves in a similar way our brains do. Recent…

Emerging Technologies · Computer Science 2014-11-20 Dorian Aur

We consider the implications of the mathematical analysis of neurone-to-neurone dynamical complex networks. We show how the dynamical behaviour of small scale strongly connected networks lead naturally to non-binary information processing…

Neurons and Cognition · Quantitative Biology 2016-09-15 Peter Grindrod

Aggregation is a common behavior by which groups of organisms arrange into cohesive groups. Whether suspended in the air (like honey bee clusters), built on the ground (such as army ant bridges), or immersed in water (such as sludge worm…

Populations and Evolution · Quantitative Biology 2022-06-23 O. Shishkov , O. Peleg

This chapter sheds light on the synaptic organization of the brain from the perspective of computational neuroscience. It provides an introductory overview on how to account for empirical data in mathematical models, implement such models…

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