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We present a set of programming tools (classes and functions written in C++ and based on Message Passing Interface) for fast development of generic parallel (and non-parallel) lattice simulations. They are collectively called MDP 1.2. These…

High Energy Physics - Lattice · Physics 2009-10-31 Massimo Di Pierro

High Performance Computing is often performed on scarce and shared computing resources. To ensure computers are used to their full capacity, administrators often incentivize large workloads that are not possible on smaller systems.…

High Energy Physics - Lattice · Physics 2018-04-18 Evan Berkowitz , Gustav R. Jansen , Kenneth McElvain , André Walker-Loud

The transport and manipulation of particles and cells in microfluidic devices has become a core methodology in domains ranging from molecular biology to manufacturing and drug design. The rational design and operation of such devices can…

Computational Engineering, Finance, and Science · Computer Science 2020-07-15 Dmitry Alexeev , Lucas Amoudruz , Sergey Litvinov , Petros Koumoutsakos

We present an open-source software package called "Hamiltonian Open Quantum System Toolkit" (HOQST), a collection of tools for the investigation of open quantum system dynamics in Hamiltonian quantum computing, including both quantum…

Quantum Physics · Physics 2022-07-01 Huo Chen , Daniel A. Lidar

Computational Science on large high performance computing resources is hampered by the complexity of these systems. Much of this complexity is due to low-level details on these resources that are exposed to the application and the end user.…

Distributed, Parallel, and Cluster Computing · Computer Science 2010-09-13 Michael W. Thomas , Erik Schnetter

Decision making in uncertain scenarios is an ubiquitous challenge in real world systems. Tools to deal with this challenge include simulations to gather information and statistical emulation to quantify uncertainty. The machine learning…

Machine Learning · Computer Science 2021-10-27 Andrei Paleyes , Mark Pullin , Maren Mahsereci , Cliff McCollum , Neil D. Lawrence , Javier Gonzalez

High-performance scientific applications require more and more compute power. The concurrent use of multiple distributed compute resources is vital for making scientific progress. The resulting distributed system, a so-called Jungle…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-03-05 Niels Drost , Jason Maassen , Maarten A. J. van Meersbergen , Henri E. Bal , F. Inti Pelupessy , Simon Portegies Zwart , Michael Kliphuis , Henk A. Dijkstra , Frank J. Seinstra

We present QDK/Chemistry, a software toolkit for quantum chemistry workflows targeting quantum computers. The toolkit addresses a key challenge in the field: while quantum algorithms for chemistry have matured considerably, the…

CHEMSMART (Chemistry Simulation and Modeling Automation Toolkit) is an open-source, Python-based framework designed to streamline quantum chemistry workflows for homogeneous catalysis and molecular modeling. By integrating job preparation,…

Chemical Physics · Physics 2025-08-28 Xinglong Zhang , Huiwen Tan , Jingyi Liu , Zihan Li , Lewen Wang , Benjamin W. J. Chen

Cloud providers usually offer diverse types of hardware for their users. Customers exploit this option to deploy cloud instances featuring GPUs, FPGAs, architectures other than x86 (e.g., ARM, IBM Power8), or featuring certain specific…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-06-28 Isabelly Rocha , Christian Göttel , Pascal Felber , Marcelo Pasin , Romain Rouvoy , Valerio Schiavoni

When using multiple software tools to analyze, visualize, or optimize models in MBSE, it is often tedious and error-prone to manually coordinate the execution of these tools and to retain their respective input and output data for later…

Software Engineering · Computer Science 2022-07-12 Jan Flink , Robert Mischke , Kathrin Schaffert , Dominik Schneider , Alexander Weinert

Large-scale distributed computing infrastructures such as the Worldwide LHC Computing Grid (WLCG) require comprehensive simulation tools for evaluating performance, testing new algorithms, and optimizing resource allocation strategies.…

The rapid expansion of the open-source language model landscape presents an opportunity to merge the competencies of these model checkpoints by combining their parameters. Advances in transfer learning, the process of fine-tuning pretrained…

Computation and Language · Computer Science 2025-01-13 Charles Goddard , Shamane Siriwardhana , Malikeh Ehghaghi , Luke Meyers , Vlad Karpukhin , Brian Benedict , Mark McQuade , Jacob Solawetz

In the rapidly evolving and maturing field of robotics, computer simulation has become an invaluable tool in the design process. Webots, a state-of-the-art robotics simulator, is often the software of choice for robotics research. Even so,…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-08-03 Matt Franchi

When designing simulation models, it is favourable to reuse existing models as far as possible to reduce the effort from the first idea to simulation results. Thanks to the OMNeT++ community, there are several toolboxes available covering a…

Software Engineering · Computer Science 2015-09-14 Raphael Riebl , Christian Facchi

Many scientific problems require multiple distinct computational tasks to be executed in order to achieve a desired solution. We introduce the Ensemble Toolkit (EnTK) to address the challenges of scale, diversity and reliability they pose.…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-05-17 Vivek Balasubramanian , Matteo Turilli , Weiming Hu , Matthieu Lefebvre , Wenjie Lei , Guido Cervone , Jeroen Tromp , Shantenu Jha

In situ approaches can accelerate the pace of scientific discoveries by allowing scientists to perform data analysis at simulation time. Current in situ workflow systems, however, face challenges in handling the growing complexity and…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-04-05 Orcun Yildiz , Dmitriy Morozov , Arnur Nigmetov , Bogdan Nicolae , Tom Peterka

Multi-Party Computation in the Head (MPCitH) algorithms are appealing candidates in the additional US NIST standardization rounds for Post-Quantum Cryptography (PQC) with respect to key sizes and mathematical hardness assumptions. However,…

Cryptography and Security · Computer Science 2024-11-20 Maximilian Schöffel , Hiandra Tomasi , Norbert Wehn

The challenges expected for the next era of the Large Hadron Collider (LHC), both in terms of storage and computing resources, provide LHC experiments with a strong motivation for evaluating ways of rethinking their computing models at many…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-07-25 Tommaso Tedeschi , Vincenzo Eduardo Padulano , Daniele Spiga , Diego Ciangottini , Mirco Tracolli , Enric Tejedor Saavedra , Enrico Guiraud , Massimo Biasotto

Open material databases storing hundreds of thousands of material structures and their corresponding properties have become the cornerstone of modern computational materials science. Yet, the raw outputs of the simulations, such as the…