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The aim of this paper is to contribute to the understanding of the pattern formation phenomenon in reaction-diffusion equations coupled with ordinary differential equations. Such systems of equations arise, for example, from modeling of…

Analysis of PDEs · Mathematics 2016-07-15 Anna Marciniak-Czochra , Grzegorz Karch , Kanako Suzuki

A symmetrical cubic discrete coupled logistic equation is proposed to model the symbiotic interaction of two isolated species. The coupling depends on the population size of both species and on a positive constant $\lambda$, named the…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Ricardo Lopez-Ruiz , Daniele Fournier-Prunaret

The development of multicellular organisms proceeds through a series of morphogenetic and cell-state transitions, transforming homogeneous zygotes into complex adults by a process of self-organization. Many of these transitions are achieved…

Tissues and Organs · Quantitative Biology 2020-07-08 Jake Cornwall Scoones , Deb Sankar Banerjee , Shiladitya Banerjee

A two species particle model on an open chain with dynamics which is non-conserving in the bulk is introduced. The dynamical rules which define the model obey a symmetry between the two species. The model exhibits a rich behavior which…

Statistical Mechanics · Physics 2009-11-10 E. Levine , R. D. Willmann

We present a methodology for designing bilateral boundary controllers for a class of systems consisting of a coupled diffusion equation with an unstable ODE at an arbitrary interior point. A folding transformation is applied about the…

Optimization and Control · Mathematics 2019-06-13 Stephen Chen , Rafael Vazquez , Miroslav Krstic

We demonstrate fully demixed (separated) robust and stable bright binary dipolar Bose-Einstein condensate soliton in a quasi-one-dimensional setting formed due to dipolar interactions for repulsive contact interactions. For large repulsive…

Quantum Gases · Physics 2015-06-18 S. K. Adhikari

In this paper we investigate the bifurcation structure of the triangular SKT model in the weak competition regime and of the corresponding fast-reaction system in 1D and 2D domains via numerical continuation methods. We show that the…

Analysis of PDEs · Mathematics 2019-11-06 Christian Kuehn , Cinzia Soresina

Diffusion-limited association reactions are ubiquitous in nature. They are particularly important for biological reactions, where the reaction rates are often determined by the diffusive transport of the molecules on two-dimensional…

Soft Condensed Matter · Physics 2020-10-06 Sumantra Sarkar

In this manuscript, we consider the modelling of cellular adhesions, which is a key interaction between biological cells. Continuum models of the diffusion-advection-reaction type have long been used in tissue modelling. In 2006, Armstrong,…

Analysis of PDEs · Mathematics 2020-01-03 Andreas Buttenschön , Thomas Hillen

We address symmetry breaking bifurcations (SBBs) in the ground-state (GS) and dipole-mode (DM) solitons of the 1D linearly coupled NLS equations, modeling the propagation of light in a dual-core planar waveguide with the Kerr nonlinearity…

Pattern Formation and Solitons · Physics 2024-09-04 Jin Song , Boris A. Malomed , Zhenya Yan

In this paper the Turing pattern formation mechanism of a two component reaction-diffusion system modeling the Schnakenberg chemical reaction coupled to linear cross-diffusion terms is studied. The linear cross-diffusion terms favors the…

Pattern Formation and Solitons · Physics 2017-05-08 G. Gambino , S. Lupo , M. Sammartino

We introduce a dual-core system with double symmetry, one between the cores, and one along each core, imposed by the spatial modulation of local nonlinearity in the form of two tightly localized spots, which may be approximated by a pair of…

Pattern Formation and Solitons · Physics 2018-05-15 Krzysztof B. Zegadlo , Nguyen Viet Hung , Aleksandr Ramaniuk , Marek Trippenbach , Boris A. Malomed

Using Landau-de Gennes theory to describe nematic order, we study a frustrated cell consisting of nematic liquid crystal confined between two parallel plates. We prove the uniqueness of equilibrium states for a small cell width. Letting the…

Analysis of PDEs · Mathematics 2015-06-17 Xavier Lamy

We consider a model for the dynamics of active cells interacting with their quiescent counterparts under the influence of acidity characterized by proton concentration. The active cells perform nonlinear diffusion and infer proliferation or…

Analysis of PDEs · Mathematics 2025-11-04 Maria Eckardt , Christina Surulescu

Theoretical results regarding two-dimensional ordinary-differential equations (ODEs) with second-degree polynomial right-hand sides are summarized, with an emphasis on limit cycles, limit cycle bifurcations and multistability. The results…

Molecular Networks · Quantitative Biology 2017-05-30 Tomislav Plesa , Tomas Vejchodsky , Radek Erban

We consider a bulk-membrane-coupled partial differential equation in which a single diffusion equation posed within the unit ball is coupled to a two-component reaction diffusion equation posed on the bounding unit sphere through a linear…

Pattern Formation and Solitons · Physics 2019-10-21 Daniel Gomez

We study molecular dynamics within populations of diffusively coupled cells under the assumption of fast diffusive exchange. As a technical tool, we propose conditions on boundedness and ultimate boundedness for systems with a singular…

Cell Behavior · Quantitative Biology 2012-12-19 Steffen Waldherr , Frank Allgöwer

Symmetry-breaking instabilities play an important role in understanding the mechanisms underlying the diversity of patterns observed in nature, such as in Turing's reaction--diffusion theory, which connects cellular signalling and transport…

Pattern Formation and Solitons · Physics 2023-12-25 Andrew L. Krause , Eamonn A. Gaffney , Thomas Jun Jewell , Václav Klika , Benjamin J. Walker

Traveling wavetrains in generalized two-species predator-prey models and two-component reaction-diffusion equations are considered. The stability of the fixed points of the traveling wave ODEs (in the usual "spatial" variable) is…

Dynamical Systems · Mathematics 2015-10-01 Stefan C. Mancas , Roy S. Choudhury

In this paper we study bifurcations in mass-action networks with two chemical species and reactant complexes of molecularity no more than two. We refer to these as planar, quadratic networks as they give rise to (at most) quadratic…

Dynamical Systems · Mathematics 2024-10-22 Murad Banaji , Balázs Boros , Josef Hofbauer