English
Related papers

Related papers: Fast conformational clustering of extensive molecu…

200 papers

We present sDBSCAN, a scalable density-based clustering algorithm in high dimensions with cosine distance. Utilizing the neighborhood-preserving property of random projections, sDBSCAN can quickly identify core points and their…

Machine Learning · Computer Science 2025-05-20 Haochuan Xu , Ninh Pham

Late fusion multi-view clustering (LFMVC) has become a rapidly growing class of methods in the multi-view clustering (MVC) field, owing to its excellent computational speed and clustering performance. One bottleneck faced by existing late…

Computer Vision and Pattern Recognition · Computer Science 2024-05-29 Qiyuan Ou , Pei Zhang , Sihang Zhou , En Zhu

We propose an effective subspace selection scheme as a post-processing step to improve results obtained by sparse subspace clustering (SSC). Our method starts by the computation of stable subspaces using a novel random sampling scheme. Thus…

Computer Vision and Pattern Recognition · Computer Science 2016-05-30 Duc-Son Pham , Ognjen Arandjelovic , Svetha Venkatesh

With rapidly increasing data, clustering algorithms are important tools for data analytics in modern research. They have been successfully applied to a wide range of domains; for instance, bioinformatics, speech recognition, and financial…

Data Structures and Algorithms · Computer Science 2015-12-01 Ka-Chun Wong

Rapid technological advances have allowed for molecular profiling across multiple omics domains from a single sample for clinical decision making in many diseases, especially cancer. As tumor development and progression are dynamic…

Methodology · Statistics 2022-02-11 Dongyan Yan , Subharup Guha

Designing large-scale geological carbon capture and storage projects and ensuring safe long-term CO2 containment - as a climate change mitigation strategy - requires fast and accurate numerical simulations. These simulations involve solving…

Mathematical Software · Computer Science 2023-04-25 Ryuichi Sai , Mathias Jacquelin , François P. Hamon , Mauricio Araya-Polo , Randolph R. Settgast

Kernel-based clustering algorithms have the ability to capture the non-linear structure in real world data. Among various kernel-based clustering algorithms, kernel k-means has gained popularity due to its simple iterative nature and ease…

Computer Vision and Pattern Recognition · Computer Science 2014-02-18 Radha Chitta , Rong Jin , Timothy C. Havens , Anil K. Jain

We consider joint estimation of multiple graphical models arising from heterogeneous and high-dimensional observations. Unlike most previous approaches which assume that the cluster structure is given in advance, an appealing feature of our…

Machine Learning · Statistics 2018-01-16 Botao Hao , Will Wei Sun , Yufeng Liu , Guang Cheng

Image clustering is one of the crucial techniques in multimedia analytics and knowledge discovery. Recently, the Deep clustering method (DC), characterized by its ability to perform feature learning and cluster assignment jointly, surpasses…

Computer Vision and Pattern Recognition · Computer Science 2026-04-07 Haiyang Zheng , Ruilin Zhang , Hongpeng Wang

A limitation of many clustering algorithms is the requirement to tune adjustable parameters for each application or even for each dataset. Some techniques require an \emph{a priori} estimate of the number of clusters while density-based…

Methodology · Statistics 2016-05-20 Jeremy F. Magland , Alex H. Barnett

Probability density function (PDF) based turbulent combustion modelling is limited by the need to store multi-dimensional PDF tables that can take up large amounts of memory. A significant saving in storage can be achieved by using various…

Computational Engineering, Finance, and Science · Computer Science 2020-05-21 Rishikesh Ranade , Genong Li , Shaoping Li , Tarek Echekki

This paper describes the incremental behaviours of Density based clustering. It specially focuses on the Density Based Spatial Clustering of Applications with Noise (DBSCAN) algorithm and its incremental approach.DBSCAN relies on a density…

Databases · Computer Science 2014-06-19 Sanjay Chakraborty , N. K. Nagwani

Insufficient capability of existing subspace clustering methods to handle data coming from nonlinear manifolds, data corruptions, and out-of-sample data hinders their applicability to address real-world clustering and classification…

Computer Vision and Pattern Recognition · Computer Science 2020-04-08 Dario Sitnik , Ivica Kopriva

Many clustering algorithms when the data are curves or functions have been recently proposed. However, the presence of contamination in the sample of curves can influence the performance of most of them. In this work we propose a robust,…

Metal Organic Frameworks (MOFs) are promising materials to help mitigate the effects of global warming by selectively absorbing $\text{CO}_{2}$ for direct capture. Accurate quantum chemistry simulations are a useful tool to help select and…

We propose a Deep Variational Clustering (DVC) framework for unsupervised representation learning and clustering of large-scale medical images. DVC simultaneously learns the multivariate Gaussian posterior through the probabilistic…

Computer Vision and Pattern Recognition · Computer Science 2021-09-23 Farzin Soleymani , Mohammad Eslami , Tobias Elze , Bernd Bischl , Mina Rezaei

Clustering is a technique for the analysis of datasets obtained by empirical studies in several disciplines with a major application for biomedical research. Essentially, clustering algorithms are executed by machines aiming at finding…

Quantitative Methods · Quantitative Biology 2024-09-30 Diego Ulisse Pizzagalli , Santiago Fernandez Gonzalez , Rolf Krause

Clustering algorithms are one of the main analytical methods to detect patterns in unlabeled data. Existing clustering methods typically treat samples in a dataset as points in a metric space and compute distances to group together similar…

Machine Learning · Computer Science 2021-10-12 Tarek Naous , Srinjay Sarkar , Abubakar Abid , James Zou

A computer simulation has to be fast to be helpful, if it is employed to study the behavior of a multicomponent dynamic system. This paper discusses modeling concepts and algorithmic techniques useful for creating such fast simulations.…

Data Structures and Algorithms · Computer Science 2007-05-23 Boris D. Lubachevsky

In this paper, we develop a method for unsupervised clustering of two-way (matrix) data by combining two recent innovations from different fields: the Sparse Subspace Clustering (SSC) algorithm [10], which groups points coming from a union…

Machine Learning · Computer Science 2015-02-24 Eric Kernfeld , Shuchin Aeron , Misha Kilmer