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We present the first parallel fixed-parameter algorithm for subgraph isomorphism in planar graphs, bounded-genus graphs, and, more generally, all minor-closed graphs of locally bounded treewidth. Our randomized low depth algorithm has a…

Data Structures and Algorithms · Computer Science 2020-07-03 Lukas Gianinazzi , Torsten Hoefler

We consider the well-studied problem of finding a spanning tree with minimum average distance between vertex pairs (called a MAD tree). This is a classic network design problem which is known to be NP-hard. While approximation algorithms…

Data Structures and Algorithms · Computer Science 2026-04-01 Tom-Lukas Breitkopf , Vincent Froese , Anton Herrmann , André Nichterlein , Camille Richer

We study the problem of computing the diameter and the mean distance of a continuous graph, i.e., a connected graph where all points along the edges, instead of only the vertices, must be taken into account. It is known that for continuous…

Computational Geometry · Computer Science 2025-03-12 Sergio Cabello , Delia Garijo , Antonia Kalb , Fabian Klute , Irene Parada , Rodrigo I. Silveira

In many modern applications, including analysis of gene expression and text documents, the data are noisy, high-dimensional, and unordered--with no particular meaning to the given order of the variables. Yet, successful learning is often…

Methodology · Statistics 2008-07-25 Ann B. Lee , Boaz Nadler , Larry Wasserman

Subgraph counting aims to count the occurrences of a subgraph template T in a given network G. The basic problem of computing structural properties such as counting triangles and other subgraphs has found applications in diverse domains.…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-03-12 Langshi Chen , Jiayu Li , Ariful Azad , Lei Jiang , Madhav Marathe , Anil Vullikanti , Andrey Nikolaev , Egor Smirnov , Ruslan Israfilov , Judy Qiu

Network motifs are recurrent, small-scale patterns of interactions observed frequently in a system. They shed light on the interplay between the topology and the dynamics of complex networks across various domains. In this work, we focus on…

Social and Information Networks · Computer Science 2023-11-08 Quintino Francesco Lotito , Federico Musciotto , Federico Battiston , Alberto Montresor

Many real-world applications give rise to large heterogeneous networks where nodes and edges can be of any arbitrary type (e.g., user, web page, location). Special cases of such heterogeneous graphs include homogeneous graphs, bipartite,…

Social and Information Networks · Computer Science 2019-05-14 Ryan A. Rossi , Nesreen K. Ahmed , Aldo Carranza , David Arbour , Anup Rao , Sungchul Kim , Eunyee Koh

A map graph is a graph admitting a representation in which vertices are nations on a spherical map and edges are shared curve segments or points between nations. We present an explicit fixed-parameter tractable algorithm for recognizing map…

Data Structures and Algorithms · Computer Science 2022-07-01 Patrizio Angelini , Michael A. Bekos , Giordano Da Lozzo , Martin Gronemann , Fabrizio Montecchiani , Alessandra Tappini

Parameterized algorithms have been subject to extensive research of recent years and allow to solve hard problems by exploiting a parameter of the corresponding problem instances. There, one goal is to devise algorithms, where the runtime…

Logic in Computer Science · Computer Science 2019-05-07 Markus Hecher

There are many classical problems in P whose time complexities have not been improved over the past decades. Recent studies of "Hardness in P" have revealed that, for several of such problems, the current fastest algorithm is the best…

Data Structures and Algorithms · Computer Science 2017-10-24 Yoichi Iwata , Tomoaki Ogasawara , Naoto Ohsaka

The problem of finding the vertex correspondence between two noisy graphs with different number of vertices where the smaller graph is still large has many applications in social networks, neuroscience, and computer vision. We propose a…

Machine Learning · Statistics 2019-07-03 Daniel L. Sussman , Youngser Park , Carey E. Priebe , Vince Lyzinski

For many algorithmic problems on graphs of treewidth $t$, a standard dynamic programming approach gives an algorithm with time and space complexity $2^{\mathcal{O}(t)}\cdot n^{\mathcal{O}(1)}$. It turns out that when one considers the more…

Data Structures and Algorithms · Computer Science 2020-07-13 Jesper Nederlof , Michał Pilipczuk , Céline M. F. Swennenhuis , Karol Węgrzycki

In this paper, we provide polynomial-time algorithms for different extensions of the matching counting problem, namely maximal matchings, path matchings (linear forest) and paths, on graph classes of bounded clique-width. For maximal…

Discrete Mathematics · Computer Science 2018-06-05 Benjamin Hellouin de Menibus , Takeaki Uno

We study connectivity problems from a fine-grained parameterized perspective. Cygan et al. (TALG 2022) obtained algorithms with single-exponential running time $\alpha^{tw} n^{O(1)}$ for connectivity problems parameterized by treewidth…

Data Structures and Algorithms · Computer Science 2023-03-01 Falko Hegerfeld , Stefan Kratsch

Two new algorithms are described for matching two dimensional coordinate lists of point sources that are signifcantly faster than previous methods. By matching rarely occurring triangles (or more complex shapes) in the two lists, and by…

Astrophysics · Physics 2009-11-13 V. Tabur

Contemporary accelerator designs exhibit a high degree of spatial localization, wherein two-dimensional physical distance determines communication costs between processing elements. This situation presents considerable algorithmic…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-08-09 Yves Baumann , Tal Ben-Nun , Maciej Besta , Lukas Gianinazzi , Torsten Hoefler , Piotr Luczynski

In this paper, we introduce a generalization of graphlets to heterogeneous networks called typed graphlets. Informally, typed graphlets are small typed induced subgraphs. Typed graphlets generalize graphlets to rich heterogeneous networks…

Social and Information Networks · Computer Science 2020-10-28 Ryan A. Rossi , Nesreen K. Ahmed , Aldo Carranza , David Arbour , Anup Rao , Sungchul Kim , Eunyee Koh

We show an $\widetilde{O}(m^{1.5} \epsilon^{-1})$ time algorithm that on a graph with $m$ edges and $n$ vertices outputs its spanning tree count up to a multiplicative $(1+\epsilon)$ factor with high probability, improving on the previous…

Data Structures and Algorithms · Computer Science 2025-05-21 Yang P. Liu , Richard Peng , Junzhao Yang

Treewidth is a measure of how tree-like a graph is. It has many important algorithmic applications because many NP-hard problems on general graphs become tractable when restricted to graphs of bounded treewidth. Algorithms for problems on…

Data Structures and Algorithms · Computer Science 2020-06-03 Johan M. M. van Rooij

A $k$-motif (or graphlet) is a subgraph on $k$ nodes in a graph or network. Counting of motifs in complex networks has been a well-studied problem in network analysis of various real-word graphs arising from the study of social networks and…

Social and Information Networks · Computer Science 2020-04-02 Taha Sevim , Muhammet Selçuk Güvel , Lale Özkahya
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