Related papers: Determinantal random subgraphs
We compute the complexity of two infinite families of finite graphs: the Sierpi\'{n}ski graphs, which are finite approximations of the well-known Sierpi\'nsky gasket, and the Schreier graphs of the Hanoi Towers group $H^{(3)}$ acting on the…
We introduce a new model of indeterminacy in graphs: instead of specifying all the edges of the graph, the input contains all triples of vertices that form a connected subgraph. In general, different (labelled) graphs may have the same set…
We study the enumeration of spinal tree-child phylogenetic networks, a rigid family of tree-child networks in which all internal vertices lie on a single root--to--leaf path. We provide two complementary combinatorial frameworks. First, we…
Recent investigations in computational biology have focused on a family of 2-colored digraphs, called 2-colored best match graphs, which naturally arise from rooted phylogenetic trees. Actually the defining properties of such graphs are…
We study random labelings of graphs conditioned on a small number (typically one or two) peaks, i.e., local maxima. We show that the boundaries of level sets of a random labeling of a square with a single peak have dimension 2, in a…
Let $\mathcal{T}_n$ be the set of all mappings $T:[n]\to[n]$, where $[n]=\{1,2,\ldots,n\}$. The corresponding graph $G_T$ of $T$, called a functional digraph, is a union of disjoint connected components. Each component is a directed cycle…
A celebrated result of Otter says the number of distinct unlabelled spanning trees in $K_n$ is $\alpha^n$ up to subexponential factors for an absolute constant $\alpha>0$. In this note, we prove that for every $0<\varepsilon<\alpha$, there…
The displayed tree phylogenetic network model is shown to sit as a natural submodel of the graphical model associated to a directed acyclic graph (DAG). This representation allows to derive a number of results about the displayed tree…
In this paper, we investigate normal trees of directed graphs, which extend the fundamental concept of normal trees of undirected graphs. We prove that a directed graph $D$ has a normal spanning tree if and only if the topological space…
Recently, so-called treebased phylogenetic networks have gained considerable interest in the literature, where a treebased network is a network that can be constructed from a phylogenetic tree, called the base tree, by adding additional…
The work in this thesis concerns the investigation of eigenvalues of the Laplacian matrix, normalized Laplacian matrix, signless Laplacian matrix and distance signless Laplacian matrix of graphs. In Chapter 1, we present a brief…
In 2003, van Dam and Haemers posed a fundamental question in spectral graph theory: does there exist a ``sensible'' matrix whose spectrum determines a random graph up to isomorphism? This paper introduces the class of {\em natural graph…
Given a set $F$ of words, one associates to each word $w$ in $F$ an undirected graph, called its extension graph, and which describes the possible extensions of $w$ on the left and on the right. We investigate the family of sets of words…
Exact eigendecomposition of large matrices is very expensive, and it is practically impossible to compute exact eigenvalues. Instead, one may set a more modest goal of approaching the empirical distribution of the eigenvalues, recovering…
We study the Laplacian on family preserving metric graphs. These are graphs that have a certain symmetry that, as we show, allows for a decomposition into a direct sum of one-dimensional operators whose properties are explicitly related to…
On a periodic planar graph whose edge weights satisfy a certain simple geometric condition, the discrete Laplacian and d-bar operators have the property that their determinants and inverses only depend on the local geometry of the graph. We…
We introduce a new class of identifiable DAG models where the conditional distribution of each node given its parents belongs to a family of generalized hypergeometric distributions (GHD). A family of generalized hypergeometric…
A $1-$factorization of a complete graph on $2n$ vertices is said to be $G-$regular if it posseses an automorphism group $G$ acting sharply transitively on the vertex-set. The problem of determining which groups can realize such a situation…
Networks with a prescribed power-law scaling in the spectrum of the graph Laplacian can be generated by evolutionary optimization. The Laplacian spectrum encodes the dynamical behavior of many important processes. Here, the networks are…
The dynamics of complex networks, being a current hot topic of many scientific fields, is often coded through the corresponding Laplacian matrix. The spectrum of this matrix carries the main features of the networks' dynamics. Here we…