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Over the past few decades, a vast amount of information on the structure of atomic nuclei has been collected, compiled, and evaluated. Accurate and reliable data are essential for the understanding of the behavior of atomic nuclei.…

Computational Physics · Physics 2024-08-21 Jérémie Dudouet , Diego Gruyer

We introduce DeepQuantum, an open-source, PyTorch-based software platform for quantum machine learning and photonic quantum computing. This AI-enhanced framework enables efficient design and execution of hybrid quantum-classical models and…

Automatic differentiation frameworks are optimized for exactly one thing: computing the average mini-batch gradient. Yet, other quantities such as the variance of the mini-batch gradients or many approximations to the Hessian can, in…

Machine Learning · Computer Science 2020-02-18 Felix Dangel , Frederik Kunstner , Philipp Hennig

We introduce a machine learning method in which energy solutions from the Schrodinger equation are predicted using symmetry adapted atomic orbitals features and a graph neural-network architecture. \textsc{OrbNet} is shown to outperform…

Computer vision techniques have immense potential for materials design applications. In this work, we introduce an integrated and general-purpose AtomVision library that can be used to generate, curate scanning tunneling microscopy (STM)…

Materials Science · Physics 2023-03-06 Kamal Choudhary , Ramya Gurunathan , Brian DeCost , Adam Biacchi

Nowadays, Neural Networks are considered one of the most effective methods for various tasks such as anomaly detection, computer-aided disease detection, or natural language processing. However, these networks suffer from the ``black-box''…

Machine Learning · Statistics 2025-05-14 Ines Ortega-Fernandez , Marta Sestelo

We introduce Net2Brain, a graphical and command-line user interface toolbox for comparing the representational spaces of artificial deep neural networks (DNNs) and human brain recordings. While different toolboxes facilitate only single…

Computer Vision and Pattern Recognition · Computer Science 2025-09-08 Domenic Bersch , Kshitij Dwivedi , Martina Vilas , Radoslaw M. Cichy , Gemma Roig

This work introduces the key operating principles for autrainer, our new deep learning training framework for computer audition tasks. autrainer is a PyTorch-based toolkit that allows for rapid, reproducible, and easily extensible training…

Sound · Computer Science 2025-04-11 Simon Rampp , Andreas Triantafyllopoulos , Manuel Milling , Björn W. Schuller

We present nerblackbox, a python library to facilitate the use of state-of-the-art transformer-based models for named entity recognition. It provides simple-to-use yet powerful methods to access data and models from a wide range of sources,…

Computation and Language · Computer Science 2023-12-08 Felix Stollenwerk

Computational materials science and chemistry span vast knowledge domains and fractured software ecosystems. Although large language models (LLMs) have demonstrated research capabilities, scaling monolithic agents to manage the rigor and…

Neural network architectures are most often conceptually designed and described in visual terms, but are implemented by writing error-prone code. PrototypeML is a machine learning development environment that bridges the dichotomy between…

Machine Learning · Computer Science 2020-07-03 Daniel Reiss Harris

This paper presents the philosophy, design and feature-set of Neural Network Distiller, an open-source Python package for DNN compression research. Distiller is a library of DNN compression algorithms implementations, with tools, tutorials…

Machine Learning · Computer Science 2019-10-29 Neta Zmora , Guy Jacob , Lev Zlotnik , Bar Elharar , Gal Novik

With deep learning models rapidly growing in size, systems-level solutions for large-model training are required. We present Amazon SageMaker model parallelism, a software library that integrates with PyTorch, and enables easy training of…

Designing a neural network architecture for molecular representation is crucial for AI-driven drug discovery and molecule design. In this work, we propose a new framework for molecular representation learning. Our contribution is threefold:…

Machine Learning · Computer Science 2022-10-18 Jiye Kim , Seungbeom Lee , Dongwoo Kim , Sungsoo Ahn , Jaesik Park

This paper describes NCRF++, a toolkit for neural sequence labeling. NCRF++ is designed for quick implementation of different neural sequence labeling models with a CRF inference layer. It provides users with an inference for building the…

Computation and Language · Computer Science 2018-06-19 Jie Yang , Yue Zhang

The study of structure-spectrum relationships is essential for spectral interpretation, impacting structural elucidation and material design. Predicting spectra from molecular structures is challenging due to their complex relationships.…

Computational Physics · Physics 2024-08-29 Fanjie Xu , Wentao Guo , Feng Wang , Lin Yao , Hongshuai Wang , Fujie Tang , Zhifeng Gao , Linfeng Zhang , Weinan E , Zhong-Qun Tian , Jun Cheng

Access to vast amounts of data along with affordable computational power stimulated the reincarnation of neural networks. The progress could not be achieved without adequate software tools, lowering the entry bar for the next generations of…

Machine Learning · Computer Science 2019-10-22 Tomasz Kornuta

DeepLog is an operational neurosymbolic framework that unifies logic and deep learning within standard PyTorch workflows. While existing neurosymbolic systems focus on a particular paradigm and semantics, DeepLog serves as a universal…

The development of spiking neural network simulation software is a critical component enabling the modeling of neural systems and the development of biologically inspired algorithms. Existing software frameworks support a wide range of…

Neural and Evolutionary Computing · Computer Science 2019-03-27 Hananel Hazan , Daniel J. Saunders , Hassaan Khan , Darpan T. Sanghavi , Hava T. Siegelmann , Robert Kozma

We present the latest release of PANNA 2.0 (Properties from Artificial Neural Network Architectures), a code for the generation of neural network interatomic potentials based on local atomic descriptors and multilayer perceptrons. Built on…

Computational Physics · Physics 2023-05-22 Franco Pellegrini , Ruggero Lot , Yusuf Shaidu , Emine Küçükbenli