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We introduce an open-source toolkit for neural machine translation (NMT) to support research into model architectures, feature representations, and source modalities, while maintaining competitive performance, modularity and reasonable…

Computation and Language · Computer Science 2017-09-13 Guillaume Klein , Yoon Kim , Yuntian Deng , Josep Crego , Jean Senellart , Alexander M. Rush

We present a PyTorch package that compiles neural networks and their weights from Turing machine descriptions, producing models that exactly simulate the specified machine without any training. Given a transition function and a set of…

Machine Learning · Computer Science 2026-05-12 Jonathan Bates

Deep learning algorithms have made many breakthroughs and have various applications in real life. Computational resources become a bottleneck as the data and complexity of the deep learning pipeline increases. In this paper, we propose…

Machine Learning · Computer Science 2021-05-05 Salman Ahmed , Hammad Naveed

We describe an open-source toolkit for neural machine translation (NMT). The toolkit prioritizes efficiency, modularity, and extensibility with the goal of supporting NMT research into model architectures, feature representations, and…

Computation and Language · Computer Science 2017-03-07 Guillaume Klein , Yoon Kim , Yuntian Deng , Jean Senellart , Alexander M. Rush

WavePacket is an open-source program package for the numerical simulation of quantum-mechanical dynamics. It can be used to solve time-independent or time-dependent linear Schr\"odinger and Liouville-von Neumann-equations in one or more…

Quantum Physics · Physics 2023-02-09 Burkhard Schmidt , Ulf Lorenz

Neural-network-based machine learning interatomic potentials have emerged as powerful tools for predicting atomic energies and forces, enabling accurate and efficient simulations in atomistic modeling. A key limitation of traditional deep…

Chemical Physics · Physics 2025-09-24 Riccardo Farris , Emanuele Telari , Nongnuch Artrith , Konstantin Neyman , Albert Bruix

We present the first public release of our generic neural network training algorithm, called SkyNet. This efficient and robust machine learning tool is able to train large and deep feed-forward neural networks, including autoencoders, for…

Instrumentation and Methods for Astrophysics · Physics 2015-06-17 Philip Graff , Farhan Feroz , Michael P. Hobson , Anthony N. Lasenby

I show that a software framework intended primarily for training of neural networks, PyTorch, is easily applied to a general function minimisation problem in science. The qualities of PyTorch of ease-of-use and very high efficiency are…

Instrumentation and Methods for Astrophysics · Physics 2018-11-20 Bojan Nikolic

The constant introduction of standardized benchmarks in the literature has helped accelerating the recent advances in meta-learning research. They offer a way to get a fair comparison between different algorithms, and the wide range of…

Machine Learning · Computer Science 2019-09-17 Tristan Deleu , Tobias Würfl , Mandana Samiei , Joseph Paul Cohen , Yoshua Bengio

OpenNMT is an open-source toolkit for neural machine translation (NMT). The system prioritizes efficiency, modularity, and extensibility with the goal of supporting NMT research into model architectures, feature representations, and source…

Computation and Language · Computer Science 2018-05-30 Guillaume Klein , Yoon Kim , Yuntian Deng , Vincent Nguyen , Jean Senellart , Alexander M. Rush

LightNet is a lightweight, versatile and purely Matlab-based deep learning framework. The idea underlying its design is to provide an easy-to-understand, easy-to-use and efficient computational platform for deep learning research. The…

Machine Learning · Computer Science 2016-08-03 Chengxi Ye , Chen Zhao , Yezhou Yang , Cornelia Fermuller , Yiannis Aloimonos

BioNetGen is an open-source software package for rule-based modeling of complex biochemical systems. Version 2.2 of the software introduces numerous new features for both model specification and simulation. Here, we report on these…

Machine learning interatomic potentials, particularly those based on deep equivariant neural networks, have demonstrated state-of-the-art accuracy and computational efficiency in atomistic modeling tasks like molecular dynamics and…

With the rise of deep neural networks for quantum chemistry applications, there is a pressing need for architectures that, beyond delivering accurate predictions of chemical properties, are readily interpretable by researchers. Here, we…

Computational Physics · Physics 2018-06-28 Kristof T. Schütt , Michael Gastegger , Alexandre Tkatchenko , Klaus-Robert Müller

We introduce NetworKit, an open-source software package for analyzing the structure of large complex networks. Appropriate algorithmic solutions are required to handle increasingly common large graph data sets containing up to billions of…

Social and Information Networks · Computer Science 2015-11-16 Christian L. Staudt , Aleksejs Sazonovs , Henning Meyerhenke

Neural networks that incorporate geometric relationships respecting SE(3) group transformations (e.g. rotations and translations) are increasingly important in molecular applications, such as molecular property prediction, protein structure…

Machine Learning · Computer Science 2025-10-21 Jose Siguenza , Bharath Ramsundar

In spite of showing unreasonable effectiveness in modalities like Text and Image, Deep Learning has always lagged Gradient Boosting in tabular data - both in popularity and performance. But recently there have been newer models created…

Machine Learning · Computer Science 2021-04-29 Manu Joseph

Nowadays, this is very popular to use the deep architectures in machine learning. Deep Belief Networks (DBNs) are deep architectures that use stack of Restricted Boltzmann Machines (RBM) to create a powerful generative model using training…

Computer Vision and Pattern Recognition · Computer Science 2016-01-07 Mohammad Ali Keyvanrad , Mohammad Mehdi Homayounpour

This paper presents SSSegmenation, which is an open source supervised semantic image segmentation toolbox based on PyTorch. The design of this toolbox is motivated by MMSegmentation while it is easier to use because of fewer dependencies…

Computer Vision and Pattern Recognition · Computer Science 2023-05-29 Zhenchao Jin

Emerging two terminal nanoscale memory devices, known as memristors, have over the past decade demonstrated great potential for implementing energy efficient neuro-inspired computing architectures. As a result, a wide-range of technologies…

Emerging Technologies · Computer Science 2022-07-29 Jinqi Huang , Spyros Stathopoulos , Alex Serb , Themis Prodromakis