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White matter segmentation methods from diffusion magnetic resonance imaging range from streamline clustering-based approaches to bundle mask delineation, but none have proposed a pediatric-specific approach. We hypothesize that a deep…

Large datasets often contain multiple distinct feature sets, or views, that offer complementary information that can be exploited by multi-view learning methods to improve results. We investigate anatomical multi-view data, where each brain…

Quantitative Methods · Quantitative Biology 2024-01-17 Yuxiang Wei , Yuqian Chen , Tengfei Xue , Leo Zekelman , Nikos Makris , Yogesh Rathi , Weidong Cai , Fan Zhang , Lauren J. O' Donnell

Fine-grained visual classification (FGVC) which aims at recognizing objects from subcategories is a very challenging task due to the inherently subtle inter-class differences. Most existing works mainly tackle this problem by reusing the…

Computer Vision and Pattern Recognition · Computer Science 2021-12-03 Ju He , Jie-Neng Chen , Shuai Liu , Adam Kortylewski , Cheng Yang , Yutong Bai , Changhu Wang

In recent years, deep learning has dominated progress in the field of medical image analysis. We find however, that the ability of current deep learning approaches to represent the complex geometric structures of many medical images is…

Computer Vision and Pattern Recognition · Computer Science 2020-12-09 Xuan Gong , Xin Xia , Wentao Zhu , Baochang Zhang , David Doermann , Lian Zhuo

Prototype-based methods use interpretable representations to address the black-box nature of deep learning models, in contrast to post-hoc explanation methods that only approximate such models. We propose the Neural Prototype Tree…

Computer Vision and Pattern Recognition · Computer Science 2021-04-16 Meike Nauta , Ron van Bree , Christin Seifert

Deep learning based computer vision models are increasingly used by urban planners to support decision making for shaping urban environments. Such models predict how people perceive the urban environment quality in terms of e.g. its safety…

Computer Vision and Pattern Recognition · Computer Science 2022-08-30 Ruben Sangers , Jan van Gemert , Sander van Cranenburgh

Recent advances in molecular and genetic research have identified a diverse range of brain tumor sub-types, shedding light on differences in their molecular mechanisms, heterogeneity, and origins. The present study performs whole-brain…

Neurons and Cognition · Quantitative Biology 2024-07-26 Debanjali Bhattacharya , Ninad Aithal , Manish Jayswal , Neelam Sinha

Although convolutional neural networks (CNNs) have achieved remarkable progress in weakly supervised semantic segmentation (WSSS), the effective receptive field of CNN is insufficient to capture global context information, leading to…

Computer Vision and Pattern Recognition · Computer Science 2022-03-17 Chunmeng Liu , Enze Xie , Wenjia Wang , Wenhai Wang , Guangyao Li , Ping Luo

The corticospinal tract (CST) is a critically important white matter fiber tract in the human brain that enables control of voluntary movements of the body. Diffusion MRI tractography is the only method that enables the study of the anatomy…

Computer Vision and Pattern Recognition · Computer Science 2023-06-16 Jianzhong He , Fan Zhang , Yiang Pan , Yuanjing Feng , Jarrett Rushmore , Erickson Torio , Yogesh Rathi , Nikos Makris , Ron Kikinis , Alexandra J. Golby , Lauren J. O'Donnell

Traumatic brain injury (TBI) disrupts thalamocortical connectivity, contributing to cognitive impairment and post-traumatic epilepsy (PTE). This study presents a novel tractography-based framework that leverages diffusion maps to capture…

Quantitative Methods · Quantitative Biology 2025-10-21 Akul Sharma , Anand A. Joshi , Richard M. Leahy

Robotic arms require precise, task-aware trajectory planning, yet sequence models that ignore motion structure often yield invalid or inefficient executions. We present a Path-based Transformer that encodes robot motion with a 3-grid…

Robotics · Computer Science 2025-10-24 Ahmed Alanazi , Duy Ho , Yugyung Lee

Acquiring plausible pathways on high-dimensional structural distributions is beneficial in several domains. For example, in the drug discovery field, a protein conformational pathway, i.e. a highly probable sequence of protein structural…

Quantitative Methods · Quantitative Biology 2025-06-04 Ziyad Oulhaj , Yoshiyuki Ishii , Kento Ohga , Kimihiro Yamazaki , Mutsuyo Wada , Yuhei Umeda , Takashi Kato , Yuichiro Wada , Hiroaki Kurihara

Transformers are central to recent successes in natural language processing and computer vision. Transformers have a mostly uniform backbone where layers alternate between feed-forward and self-attention in order to build a deep network.…

Deep Learning models have become potential candidates for auditory neuroscience research, thanks to their recent successes on a variety of auditory tasks. Yet, these models often lack interpretability to fully understand the exact…

Sound · Computer Science 2021-08-04 Rachid Riad , Julien Karadayi , Anne-Catherine Bachoud-Lévi , Emmanuel Dupoux

Recent Large Vision-Language Models (LVLMs) demonstrate remarkable capabilities in image understanding and natural language generation. However, current approaches focus predominantly on global image understanding, struggling to simulate…

Computer Vision and Pattern Recognition · Computer Science 2026-02-25 Fan Yang , Shurong Zheng , Hongyin Zhao , Yufei Zhan , Xin Li , Yousong Zhu , Chaoyang Zhao Ming Tang , Jinqiao Wang

Deep networks have been successfully applied to visual tracking by learning a generic representation offline from numerous training images. However the offline training is time-consuming and the learned generic representation may be less…

Computer Vision and Pattern Recognition · Computer Science 2015-08-25 Kaihua Zhang , Qingshan Liu , Yi Wu , Ming-Hsuan Yang

An essential aspect of texture analysis is the extraction of features that describe the distribution of values in local, spatial regions. We present a localized histogram layer for artificial neural networks. Instead of computing global…

Machine Learning · Computer Science 2021-12-30 Joshua Peeples , Weihuang Xu , Alina Zare

Generating cognitive-aligned layered SVGs remains challenging due to existing methods' tendencies toward either oversimplified single-layer outputs or optimization-induced shape redundancies. We propose LayerTracer, a diffusion transformer…

Computer Vision and Pattern Recognition · Computer Science 2025-08-14 Yiren Song , Danze Chen , Mike Zheng Shou

Coordinate-based neural implicit representation or implicit fields have been widely studied for 3D geometry representation or novel view synthesis. Recently, a series of efforts have been devoted to accelerating the speed and improving the…

Computer Vision and Pattern Recognition · Computer Science 2024-02-23 Renyi Mao , Qingshan Xu , Peng Zheng , Ye Wang , Tieru Wu , Rui Ma

Tractography traces the peak directions extracted from fiber orientation distribution (FOD) suffering from ambiguous spatial correspondences between diffusion directions and fiber geometry, which is prone to producing erroneous tracks while…

Computer Vision and Pattern Recognition · Computer Science 2024-08-20 Yuanjing Feng , Lei Xie , Jingqiang Wang , Qiyuan Tian , Jianzhong He , Qingrun Zeng , Fei Gao