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The longest square subsequence (LSS) problem consists of computing a longest subsequence of a given string $S$ that is a square, i.e., a longest subsequence of form $XX$ appearing in $S$. It is known that an LSS of a string $S$ of length…
Computation on compressed strings is one of the key approaches to processing massive data sets. We consider local subsequence recognition problems on strings compressed by straight-line programs (SLP), which is closely related to…
We raise the question of approximating the compressibility of a string with respect to a fixed compression scheme, in sublinear time. We study this question in detail for two popular lossless compression schemes: run-length encoding (RLE)…
String complexity is defined as the cardinality of a set of all distinct words (factors) of a given string. For two strings, we introduce the joint string complexity as the cardinality of a set of words that are common to both strings.…
We consider the problem of identifying tandem scattered subsequences within a string. Our algorithm identifies a longest subsequence which occurs twice without overlap in a string. This algorithm is based on the Hunt-Szymanski algorithm,…
Kolmogorov-Chaitin complexity has long been believed to be impossible to approximate when it comes to short sequences (e.g. of length 5-50). However, with the newly developed \emph{coding theorem method} the complexity of strings of length…
We study the properties of Tsallis entropy and Shannon entropy from the point of view of algorithmic randomness. In algorithmic information theory, there are two equivalent ways to define the program-size complexity K(s) of a given finite…
The problem of guessing a random string is revisited. A close relation between guessing and compression is first established. Then it is shown that if the sequence of distributions of the information spectrum satisfies the large deviation…
The longest common substring with $k$-mismatches problem is to find, given two strings $S_1$ and $S_2$, a longest substring $A_1$ of $S_1$ and $A_2$ of $S_2$ such that the Hamming distance between $A_1$ and $A_2$ is $\le k$. We introduce a…
An infinite binary sequence has randomness rate at least $\sigma$ if, for almost every $n$, the Kolmogorov complexity of its prefix of length $n$ is at least $\sigma n$. It is known that for every rational $\sigma \in (0,1)$, on one hand,…
We investigate the variance of the length of the longest common subsequences of two independent random words of size $n$, where the letters of one word are i.i.d. uniformly drawn from $\{\alpha_1, \alpha_2, \cdots, \alpha_m\}$, while the…
Consider the following prediction problem. Assume that there is a block box that produces bits according to some unknown computable distribution on the binary tree. We know first $n$ bits $x_1 x_2 \ldots x_n$. We want to know the…
Determining whether an unordered collection of overlapping substrings (called shingles) can be uniquely decoded into a consistent string is a problem that lies within the foundation of a broad assortment of disciplines ranging from…
It has been found that stochastic algorithms often find good solutions much more rapidly than inherently-batch approaches. Indeed, a very useful rule of thumb is that often, when solving a machine learning problem, an iterative technique…
We present a novel approach for investigating lens phenomenology of cosmic strings in order to elaborate detection strategies in galaxy deep field images. To account for the complexity of the projected energy distribution of string networks…
In natural language using short sentences is considered efficient for communication. However, a text composed exclusively of such sentences looks technical and reads boring. A text composed of long ones, on the other hand, demands…
In this paper we investigate the \emph{approximate string matching problem} when the allowed edit operations are \emph{non-overlapping unbalanced translocations of adjacent factors}. Such kind of edit operations take place when two adjacent…
Numbers and numerical vectors account for a large portion of data. However, recently the amount of string data generated has increased dramatically. Consequently, classifying string data is a common problem in many fields. The most widely…
Consider a binary string $x$ of length $n$ whose Kolmogorov complexity is $\alpha n$ for some $\alpha<1$. We want to increase the complexity of $x$ by changing a small fraction of bits in $x$. This is always possible: Buhrman, Fortnow,…
PARITY is the problem of determining the parity of a string $f$ of $n$ bits given access to an oracle that responds to a query $x\in\{0,1,...,n-1\}$ with the $x^{\rm th}$ bit of the string, $f(x)$. Classically, $n$ queries are required to…