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1. An understanding of how biodiversity confers ecosystem stability is crucial in managing ecosystems under major environmental changes. Multiple biodiversity drivers can stabilize ecosystem functions over time. However, we know little…

The acoustic properties of a fish school have been modelled using a cloud of bubbles. Similar to how bubble clouds present a collective monopole mode, a fish school also shows a collective breathing mode in which the whole school resonates…

Biological Physics · Physics 2017-07-19 F. Meseguer , F. Ramiro-Manzano

Cooperation among unrelated individuals is frequently observed in social groups when their members combine efforts and resources to obtain a shared benefit that is unachievable by an individual alone. However, understanding why cooperation…

Indoor lighting affects cognition, affect, and behavioural regulation, but these effects are often treated as isolated findings rather than as parts of a unified process. This paper proposes an active inference account of shared indoor…

Quantitative Methods · Quantitative Biology 2026-05-05 Luca M. Possati

Temporal resolution of visual information processing is thought to be an important factor in predator-prey interactions, shaped in the course of evolution by animals' ecology. Here I show that light can be considered to have a dual role of…

Neurons and Cognition · Quantitative Biology 2019-10-25 Bartosz Jura

Sperm swimming at low Reynolds number have strong hydrodynamic interactions when their concentration is high in vivo or near substrates in vitro. The beating tails not only propel the sperm through a fluid, but also create flow fields…

Biological Physics · Physics 2009-01-09 Yingzi Yang , Jens Elgeti , Gerhard Gompper

Zooplankton live in dynamic environments where turbulence may challenge their limited swimming abilities. How this interferes with fundamental behavioral processes remains elusive. We reconstruct simultaneously the trajectories of flow…

Fluid Dynamics · Physics 2020-12-03 François-Gaël Michalec , Itzhak Fouxon , Sami Souissi , Markus Holzner

Many species of microbes cooperate by producing public goods from which they collectively benefit. However, these populations are under the risk of being taken over by cheating mutants that do not contribute to the pool of public goods.…

Populations and Evolution · Quantitative Biology 2023-12-20 Gurdip Uppal , Dervis Can Vural

We present a model of soft active particles that leads to a rich array of collective behavior found also in dense biological swarms of bacteria and other unicellular organisms. Our model uses only local interactions, such as Vicsek-type…

Soft Condensed Matter · Physics 2016-10-13 Ruben van Drongelen , Anshuman Pal , Carl P. Goodrich , Timon Idema

The light environment controls the swimming of microalgae through a light-seeking and avoiding behaviour, which is known as phototaxis. In this work, we exploit phototaxis to control the migration and concentration of populations of the…

Biological Physics · Physics 2021-07-21 Praneet Prakash , Ottavio A. Croze

Animals chain movements into long-lived motor strategies, exhibiting variability across scales that reflects the interplay between internal states and environmental cues. To reveal structure in such variability, we build Markov models of…

The competition for resources is a defining feature of microbial communities. In many contexts, from soils to host-associated communities, highly diverse microbes are organized into metabolic groups or guilds with similar resource…

Physics and Society · Physics 2025-05-05 Xiaowen Chen , Kyle Crocker , Seppe Kuehn , Aleksandra M. Walczak , Thierry Mora

Collective vigilance describes how animals in groups benefit from the predator detection efforts of others. Empirical observations typically find either a many-eyes strategy with all (or many) group members maintaining a low level of…

Populations and Evolution · Quantitative Biology 2025-11-25 Charlie Pilgrim , Andrew M Bate , Anna Sigalou , Mélisande Aellen , Joe Morford , Elizabeth Warren , Christopher Krupenye , Dora Biro , Richard P Mann

While mathematical models, in particular self-propelled particle (SPP) models, capture many of the observed properties of large fish schools, they do not always capture the interactions of smaller shoals. Nor do these models tend to account…

Neurons and Cognition · Quantitative Biology 2023-04-04 Linnéa Gyllingberg , Alex Szorkovszky , David J. T. Sumpter

Collective animal movement fascinates children and scientists alike. One of the most commonly given explanations for collective animal movement is improved foraging. Animals are hypothesized to gain from searching for food in groups. Here,…

Multiagent Systems · Computer Science 2019-04-08 Ravid Cohen , Yossi Yovel , Dan Halperin

Plants have developed intricate mechanisms to adapt to changing light conditions. Besides photo- and helio- tropism -- the differential growth towards light and the diurnal motion with respect to sunlight -- chloroplast motion acts as a…

Soft Condensed Matter · Physics 2023-02-22 Nico Schramma , Cintia Perugachi Israëls , Maziyar Jalaal

The spatial segregation of species is fundamental to ecosystem formation and stability. Behavioural strategies may determine where species are located and how their interactions change the local environment arrangement. In response to…

Populations and Evolution · Quantitative Biology 2021-03-23 B. Moura , J. Menezes

Coordinated movement and self-organisation of active self-driven agents is common in nature and is seen across different scales, from herds of animals to collective motion in bacteria. Often, these systems are heterogeneous in composition,…

Adaptation and Self-Organizing Systems · Physics 2026-04-28 Balagopal Nair , Arshed Nabeel , Danny Raj M

Researchers puzzle over questions as to how rare species survive extinction, and why a significant proportion of microbial taxa are dormant. Computational simulation modeling by a genetic algorithm provides some answers. First, a…

Populations and Evolution · Quantitative Biology 2025-07-01 Sasanka Sekhar Chanda

The emergence of collective motion, also known as flocking or swarming, in groups of moving individuals who orient themselves using only information from their neighbors is a very general phenomenon that is manifested at multiple spatial…

Statistical Mechanics · Physics 2016-04-26 David A. Quint , Ajay Gopinathan