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We derive from first principles a three-dimensional theory of self-propelled particle swarming in a viscous fluid environment. Our model predicts emergent collective behavior that depends critically on fluid opacity, mechanism of…

Soft Condensed Matter · Physics 2026-05-12 Yao-Li Chuang , M. R. D'Orsogna , T. Chou

Three basic factors govern the individual behaviour of a particle: the inertia from its previous displacement; the attraction to its own best experience; and the attraction to a given neighbour's best experience. The importance awarded to…

Physics and Society · Physics 2021-01-28 Johann Sienz , Mauro S. Innocente

Background: Recent research in animal behaviour has contributed to determine how alignment, turning responses, and changes of speed mediate flocking and schooling interactions in different animal species. Here, we address specifically the…

Quantitative Methods · Quantitative Biology 2018-09-05 Andrea Perna , Guillaume Gregoire , Richard P. Mann

Collective dynamics of many interacting particles have been widely studied because of a wealth of their behavioral patterns quite different from the individual traits. A selective way of birds that reacts to their neighbors is one of the…

Adaptation and Self-Organizing Systems · Physics 2022-05-04 Narina Jung , Byung Mook Weon , Pilwon Kim

We develop and analyze a spatial temporal model of light driven ecotoxicological processes, motivated by an aquatic predator-prey system of algae and \textsl{Daphnia} subject to a contaminant. Population dynamics are driven by light, which…

Populations and Evolution · Quantitative Biology 2021-01-01 A. Ibragimov , A. Peace

Here we show that coupling to curvature has profound effects on collective motion in active systems, leading to patterns not observed in flat space. Biological examples of such active motion in curved environments are numerous: curvature…

Soft Condensed Matter · Physics 2015-03-05 Rastko Sknepnek , Silke Henkes

Tidal and riverine hydrokinetic turbines offer promising solutions for renewable energy generation in aquatic environments. However, their ecological impact, especially on fish behavior, warrants a thorough investigation. This study…

Varying environmental conditions affect relations between interacting individuals in social dilemmas, thus affecting also the evolution of cooperation. Oftentimes these environmental variations are seasonal and can therefore be…

Physics and Society · Physics 2019-09-02 Attila Szolnoki , Matjaz Perc

We investigate the effect of a dynamical collective mode coupled with quasiparticles at specific wavevectors only. This coupling describes the incipient tendency to order and produces shadow spectral features at high energies, while leaving…

Strongly Correlated Electrons · Physics 2012-05-22 M. Grilli , G. Seibold , A. Di Ciolo , J. Lorenzana

Photosynthetic microbes have evolved and successfully adapted to the ever-changing environmental conditions in complex microhabitats throughout almost all ecosystems on Earth. In the absence of light, they can sustain their biological…

Biological Physics · Physics 2024-07-16 Alexandros A. Fragkopoulos , Florian Böhme , Nicole Drewes , Oliver Bäumchen

We study the collective motion of confined spherical microswimmers such as active colloids which we model by so-called squirmers. To simulate hydrodynamic flow fields including thermal noise, we use the method of multi-particle collision…

Soft Condensed Matter · Physics 2014-03-20 Andreas Zöttl , Holger Stark

How systems are endowed with migration capacity is a fascinating question with implications ranging from the design of novel active systems to the control of microbial populations. Bacteria, which can be found in a variety of environments,…

Biological Physics · Physics 2017-07-03 Marc Hennes , Julien Tailleur , Gaëlle Charron , Adrian Daerr

Coral reef ecosystems support significant biological activities and harbor huge diversity, but they are facing a severe crisis driven by anthropogenic activities and climate change. An important behavioral trait of the coral holobiont is…

Quantitative Methods · Quantitative Biology 2020-11-03 Shuaifeng Li , Liza M. Roger , Lokander Kumar , Nastassja Lewinski , Judith Klein , Alex Gagnon , Hollie M. Putnam , Jinkyu Yang

Organisms may respond to local stimuli that benefit or threaten their fitness. The adaptive movement behaviour may allow individuals to adjust their speed to maximise the chances of being in comfort zones, where death risk is minimal. We…

Populations and Evolution · Quantitative Biology 2022-12-27 M. Tenorio , E. Rangel , J. Menezes

Collective behaviors exhibited by animal groups, such as fish schools, bird flocks, or insect swarms are fascinating examples of self-organization in biology. Concepts and methods from statistical physics have been used to argue…

Biological Physics · Physics 2023-03-14 Pawel Romanczuk , Bryan C. Daniels

Current theories about mechanisms promoting species co-existence in diverse communities assume that species only interact ecologically. Species are treated as discrete evolutionary entities, even though abundant empirical evidence indicates…

Populations and Evolution · Quantitative Biology 2013-11-13 Charles Cannon , Manuel Lerdau

Learning the activities of animals is important for the purpose of monitoring their welfare vis a vis their behaviour with respect to their environment and conspecifics. While previous works have largely focused on activity recognition in a…

Machine Learning · Computer Science 2018-11-26 Kehinde Owoeye , Stephen Hailes

The study of self-propelled particles is a fast-growing research topic where biologically inspired movement is increasingly becoming of much interest. A relevant example is the collective motion of social insects, whose variety and…

Statistical Mechanics · Physics 2022-04-26 Leticia R. Paiva , Sidiney G. Alves , Lucas Lacasa , Og DeSouza , Octavio Miramontes

Bacteria typically reside in heterogeneous environments with various chemogradients where motile cells can gain an advantage over non-motile cells. Since motility is energetically costly, cells must optimize their swimming speed and…

Populations and Evolution · Quantitative Biology 2020-05-05 Gurdip Uppal , Weiyi Hu , Dervis Can Vural

Circumnutations are widespread in plants and typically associated with exploratory movements, however a quantitative understanding of their role remains elusive. In this study we report, for the first time, the role of noisy circumnutations…

Tissues and Organs · Quantitative Biology 2023-08-02 Chantal Nguyen , Imri Dromi , Aharon Kempinski , Gabriella E. C. Gall , Orit Peleg , Yasmine Meroz
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