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The time-dependent optical properties of microalgae are crucial for light transfer in photobioreactor (PBR) designs. Here, the time-dependent optical properties were derived using electromagnetic scattering theory informed by the…

Applied Physics · Physics 2021-01-26 Chunyang Ma

X-ray Free Electron Lasers (XFEL) are revolutionary photons sources, whose ultrashort, brilliant pulses are expected to allow single molecule diffraction experiments providing structural information on the atomic length scale. This ultimate…

Optics · Physics 2015-05-20 Andrea Fratalocchi , Giancarlo Ruocco

Motile cilia are a striking example of functional cellular organelle, conserved across all the eukaryotic species. Motile cilia allow swimming of cells and small organisms and transport of liquids across epithelial tissues. Whilst the…

Tissues and Organs · Quantitative Biology 2020-01-13 Pietro Cicuta

The routine atomic-resolution structure determination of single particles is expected to have profound implications for probing the structure-function relationship in systems ranging from energy materials to biological molecules.…

Many living organisms can exploit quantum mechanical effects to gain distinct biological advantages. In plants, photosynthesis uses quantum coherence to achieve near 100% efficiency in energy transfer. With advances in experimental…

Quantum Physics · Physics 2025-11-19 Rong-Hang Chen , Jing Dong , Wen Yang , Qing Ai , Gui-Lu Long

Living organisms are primarily made of cells. Identifying them and characterizing their geometry and spatial distribution is a first step towards building multi-scale models of these biomaterials. We propose a method to count cells using…

Quantitative Methods · Quantitative Biology 2021-12-21 Anna Madra , Alex YS. Lin , Daniel J. Vanselow , Keith C. Cheng

Elemental abundance patterns can provide vital clues to the formation and enrichment history of a stellar population. Here we present an investigation of the Galactic bulge, where we apply principal component abundance analysis (PCAA)---a…

Astrophysics of Galaxies · Physics 2012-08-31 Brett H. Andrews , David H. Weinberg , Jennifer A. Johnson , Thomas Bensby , Sofia Feltzing

Materials characterization and property measurements are a cornerstone of material science, providing feedback from synthesis to applications. Traditionally, a single sample is used to derive information on a single point in composition…

Bioprinting is an enabling biofabrication technique to create heterogeneous tissue constructs according to patient-specific geometries and compositions. Optimization of bioinks as per requirements for specific tissue applications is a…

Materials Science · Physics 2022-10-25 Abhinaba Banerjee , Sudipto Datta , Amit Roy Chowdhury , Pallab Datta

Cryo-EM data processing typically focuses on the structure of the main conformational state under investigation and discards images that belong to other states. This approach can reach atomic resolution, but ignores vast amounts of valuable…

Biomolecules · Quantitative Biology 2024-02-20 Felix Lambrecht , Andreas Kröpelin , Mario Lüttich , Michael Habeck , David Haselbach , Holger Stark

The ocean is filled with microscopic microalgae called phytoplankton, which together are responsible for as much photosynthesis as all plants on land combined. Our ability to predict their response to the warming ocean relies on…

Applications · Statistics 2022-08-05 Sangwon Hyun , Mattias Rolf Cape , Francois Ribalet , Jacob Bien

Single-particle imaging experiments of biomolecules at x-ray free-electron lasers (XFELs) require processing of hundreds of thousands (or more) of images that contain very few x-rays. Each low-flux image of the diffraction pattern is…

Instrumentation and Detectors · Physics 2012-03-16 Hugh T. Philipp , Kartik Ayyer , Mark W. Tate , Veit Elser , Sol M. Gruner

Biologists study Diatoms, a fundamental algae, to assess the health of aquatic systems. Diatom specimens have traditionally been preserved on analog slides, where a single slide can contain thousands of these microscopic organisms.…

Information Retrieval · Computer Science 2024-11-04 Kio Polson , Marina Potapova , Uttam Meena , Chad Peiper , Joshua Brown , Joshua Agar , Jane Greenberg

X-ray absorption spectroscopy and X-ray magnetic circular dichroism have long served as indispensable tools for probing the electronic and magnetic properties of transition-metal compounds with elemental selectivity. In recent years, the…

Materials Science · Physics 2026-05-11 Hiroki Wadati , Kohei Yamamoto , Kohei Yamagami

Electron microscopy is a powerful tool for studying the properties of materials down to their atomic structure. In many cases, the quantitative interpretation of images requires simulations based on atomistic structure models. These…

Many nucleosynthetic channels create the elements, but two-parameter models characterized by $\alpha$ and Fe nonetheless predict stellar abundances in the Galactic disk to accuracies of 0.02 to 0.05 dex for most measured elements, near the…

The X-ray integral field unit for the Athena mission consists of a microcalorimeter transition edge sensor pixel array. Incoming photons generate pulses which are analyzed in terms of energy, in order to assemble the X-ray spectrum. Usually…

Instrumentation and Methods for Astrophysics · Physics 2016-11-23 C. P. de Vries , R. M. Schouten , J. van der Kuur , L. Gottardi , H. Akamatsu

Throughout the history of electron microscopy, ribosomes have served as an ideal subject for imaging and technological development, which in turn has driven our understanding of ribosomal biology. Here, we provide a historical perspective…

Biomolecules · Quantitative Biology 2023-08-31 Samantha M. Webster , Mira B. May , Barrett M. Powell , Joseph H. Davis

Understanding complex biological macromolecules, especially proteins, is vital for grasping their diverse chemical functions with direct impact in biology and pharmacology. While techniques like X-ray crystallography and cryo-electron…

Biomolecules · Quantitative Biology 2024-04-12 S. H. Mejias , A. L. Cortajarena , R. Mincigrucci , C. Svetina , C. Masciovecchio

We present Frequency Marching, FM, an algorithm that refines three-dimensional electron density distributions from solution X-ray scattering data in both the small- and wide-angle regimes. This algorithm is based on a series of optimization…

Biological Physics · Physics 2020-12-25 Yen-Lin Chen , Lois Pollack