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We study a far-from-equilibrium system of interacting particles, hopping between sites of a 1d lattice with a rate which increases with the number of particles at interacting sites. We find that clusters of particles, which initially…

Statistical Mechanics · Physics 2015-05-30 Bartlomiej Waclaw , Martin R. Evans

This study is devoted to the long-term behavior of nucleation, growth and fragmentation equations, modeling the spontaneous formation and kinetics of large polymers in a spatially homogeneous and closed environment. Such models are, for…

Analysis of PDEs · Mathematics 2018-11-20 Juan Calvo , Marie Doumic , Benoît Perthame

The inclusion process is a stochastic lattice gas, which is a natural bosonic counterpart of the well-studied exclusion process and has strong connections to models of heat conduction and applications in population genetics. Like the…

Mathematical Physics · Physics 2013-07-01 Stefan Grosskinsky , Frank Redig , Kiamars Vafayi

We show in numerical simulations that a system of two coupled replicas of a binary mixture of hard spheres undergoes a phase transition in equilibrium at a density slightly smaller than the glass transition density for an unreplicated…

Disordered Systems and Neural Networks · Physics 2014-03-03 G. Parisi , B. Seoane

Suspensions of swimming particles exhibit complex collective behaviors driven by hydrodynamic interactions, showing persistent large-scale flows and long-range correlations. While heavily studied, it remains unclear how such structures…

Soft Condensed Matter · Physics 2025-05-27 Bryce Palmer , Scott Weady , Michael O'Brien , Blakesley Burkhart , Michael J. Shelley

Conformational transitions are ubiquitous in biomolecular systems, have significant functional roles and are subject to evolutionary pressures. Here we provide a first theoretical framework for topological transition, i.e. conformational…

Disordered Systems and Neural Networks · Physics 2015-09-02 Alireza Mashaghi , Abolfazl Ramezanpour

Cells regulate gene expression in part by forming DNA-protein condensates in the nucleus. While existing theories describe the equilibrium size and stability of such condensates, their dynamics remain less understood. Here, we use…

Soft Condensed Matter · Physics 2025-12-22 Adam R. Lamson , Mohammadhossein Firouznia , Michael J. Shelley

Topological constraints (TCs) between polymers determine the behaviour of complex fluids such as creams, oils and plastics. Most of the polymer solutions used every day life employ linear chains; their behaviour is accurately captured by…

Soft Condensed Matter · Physics 2020-10-07 Fabio Landuzzi , Takenobu Nakamura , Davide Michieletto , Takahiro Sakaue

A simple model of a polymer with long rigid segments which interact via excluded volume repulsions and short ranged attractions is proposed. The coil-globule transition of this model polymer is strongly first order, the globule is…

Soft Condensed Matter · Physics 2009-10-30 Richard P. Sear

We study the condensation transition of counterions on a charged cylinder via Monte Carlo simulations. Varying the cylinder radius systematically in relation to the system size, we find that all counterions are bound to the cylinder and the…

Statistical Mechanics · Physics 2016-11-10 Minryeong Cha , Juyeon Yi , Yong Woon Kim

An important property of Kingman's coalescent is that, starting from a state with an infinite number of blocks, over any positive time horizon, it transitions into an almost surely finite number of blocks. This is known as `coming down from…

Probability · Mathematics 2017-01-18 Andreas E. Kyprianou , Steven Pagett , Tim Rogers , Jason Schweinsberg

We have used computer simulation to study the collapse of a hydrophobic chain in water. We find that the mechanism of collapse is much like that of a first order phase transition. The evaporation of water in the vicinity of the polymer…

Soft Condensed Matter · Physics 2007-05-23 Pieter Rein ten Wolde , David Chandler

We investigate the kinetics of a polymer collapse due to the formation of irreversible crosslinks between its monomers. Using the contact probability $P(s)$ as a scale-dependent order parameter depending on the chemical distance $s$, our…

Soft Condensed Matter · Physics 2018-08-15 Vittore F. Scolari , Guillaume Mercy , Romain Koszul , Annick Lesne , Julien Mozziconacci

Liquids with quasi - chemical bonding between molecules are described in terms of vertex model. It is shown that this bonding results in liquid - liquid phase transition, which occurs between phases with different mean density of…

Statistical Mechanics · Physics 2007-05-23 L. Son , R. Ryltcev

The zero-range process is a stochastic interacting particle system that exhibits a condensation transition under certain conditions on the dynamics. It has recently been found that a small perturbation of a generic class of jump rates leads…

Statistical Mechanics · Physics 2015-03-19 Luis Carlos Garcia del Molino , Paul Chleboun , Stefan Grosskinsky

The mode-coupling theory of the glass transition treats the dynamics of supercooled liquids in terms of two-point density correlation functions. Here we consider a generalized, hierarchical formulation of schematic mode-coupling equations…

Statistical Mechanics · Physics 2014-11-27 Liesbeth M. C. Janssen , Peter Mayer , David R. Reichman

Dense suspensions of particles are relevant to many applications and are a key platform for developing a fundamental physics of out-of-equilibrium systems. They present challenging flow properties, apparently turning from liquid to solid…

Soft Condensed Matter · Physics 2022-03-22 Christopher Ness , Ryohei Seto , Romain Mari

We consider turbulence in the Gross-Pitaevsky model and study the creation of a coherent condensate via an inverse cascade originated at small scales. The growth of the condensate leads to a spontaneous breakdown of symmetries of…

Chaotic Dynamics · Physics 2012-01-06 Natalia Vladimirova , Stanislav Derevyanko , Gregory Falkovich

We investigate the dynamics and the pathways of the collapse of a single, semiflexible polymer in a poor solvent via 3-D Brownian Dynamics simulations. Earlier work indicates that the condensation of semiflexible polymers generically…

Soft Condensed Matter · Physics 2009-11-10 Alberto Montesi , Matteo Pasquali , F. C. MacKintosh

In a recent letter, a simple method was proposed to generate solvable models that predict the critical properties of statistical systems in hyperspherical geometries. To that end, it was shown how to reduce a random walk in $D$ dimensions…

High Energy Physics - Lattice · Physics 2018-07-06 S. Boettcher
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