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Related papers: Structural analysis of water networks

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Disordered systems like liquids, gels, glasses, or granular materials are not only ubiquitous in daily life and in industrial applications but they are also crucial for the mechanical stability of cells or the transport of chemical and…

Disordered Systems and Neural Networks · Physics 2019-04-30 Zhen Zhang , Walter Kob

Many real-world networks are so large that we must simplify their structure before we can extract useful information about the systems they represent. As the tools for doing these simplifications proliferate within the network literature,…

Physics and Society · Physics 2015-05-13 M. Rosvall , D. Axelsson , C. T. Bergstrom

We investigate the structural similarities between liquid water and 53 ices, including 20 knowncrystalline phases. We base such similarity comparison on the local environments that consist of atoms within a certain cutoff radius of a…

Computational Physics · Physics 2020-06-25 Bartomeu Monserrat , Jan Gerit Brandenburg , Edgar A. Engel , Bingqing Cheng

Recent experimental realizations of liquid-liquid phase separation of active liquid crystals have offered an insight into the interaction between phase separation, ubiquitous in soft matter and biology, and chaotic active flows. In this…

Soft Condensed Matter · Physics 2025-04-23 Paarth Gulati , Fernando Caballero , M. Cristina Marchetti

We investigate a minimal model for non-crystalline water, defined on a Husimi lattice. The peculiar random-regular nature of the lattice is meant to account for the formation of a random 4-coordinated hydrogen-bond network. The model turns…

Soft Condensed Matter · Physics 2015-05-19 Andrea Pagnani , Marco Pretti

In an increasingly connected world, the resilience of networked dynamical systems is important in the fields of ecology, economics, critical infrastructures, and organizational behaviour. Whilst we understand small-scale resilience well,…

Adaptation and Self-Organizing Systems · Physics 2018-08-21 Giannis Moutsinas , Weisi Guo

Water provides the driving force for the assembly and stability of many cellular components. Despite its impact on biological functions, a nanoscale understanding of the relationship between its structure and dynamics under soft confinement…

Soft Condensed Matter · Physics 2021-01-18 Fausto Martelli , Jason Crain , Giancarlo Franzese

Complex network theory provides an elegant and powerful framework to statistically investigate different types of systems such as society, brain or the structure of local and long-range dynamical interrelationships in the climate system.…

Networks are universally considered as complex structures of interactions of large multi-component systems. In order to determine the role that each node has inside a complex network, several centrality measures have been developed. Such…

Physics and Society · Physics 2019-08-20 Malbor Asllani , Bruno Requiao da Cunha , Ernesto Estrada , James P. Gleeson

When a fluid comprised of multiple phases or constituents flows through a network, non-linear phenomena such as multiple stable equilibrium states and spontaneous oscillations can occur. Such behavior has been observed or predicted in a…

Fluid Dynamics · Physics 2015-06-05 Casey M. Karst , Brian D. Storey , John B. Geddes

We report a detailed computational study by Brownian Dynamics simulations of the structure and dynamics of a liquid of patchy particles which develops an amorphous tetrahedral network upon decreasing temperature. The highly directional…

Soft Condensed Matter · Physics 2016-12-02 Sandalo Roldan-Vargas , Lorenzo Rovigatti , Francesco Sciortino

Anomalous behavior of water in superooled region (namely decrease of density and sharp increase of response functions at atmospheric pressure) are manly associated with either existence of liquid-liquid criticality or re-entering…

Chemical Physics · Physics 2021-09-03 Michal Duška

We consider data with multiple observations or reports on a network in the case when these networks themselves are connected through some form of network ties. We could take the example of a cognitive social structure where there is another…

Social and Information Networks · Computer Science 2021-11-16 Johan Koskinen , Pete Jones , Darkhan Medeuov , Artem Antonyuk , Kseniia Puzyreva , Nikita Basov

The ability to reroute and control flow is vital to the function of venation networks across a wide range of organisms. By modifying individual edges in these networks, either by adjusting edge conductances or creating and destroying edges,…

Soft Condensed Matter · Physics 2021-01-14 Jason W. Rocks , Andrea J. Liu , Eleni Katifori

We introduce a new topological descriptor of a network called the density decomposition which is a partition of the nodes of a network into regions of uniform density. The decomposition we define is unique in the sense that a given network…

Social and Information Networks · Computer Science 2017-12-18 Glencora Borradaile , Theresa Migler , Gordon Wilfong

Empirical studies of graphs have contributed enormously to our understanding of complex systems. Known today as network science, what was originally a theoretical study of graphs has grown into a more scientific exploration of communities…

Quantitative Methods · Quantitative Biology 2020-01-01 Ryan E. Langendorf , Debra S. Goldberg

An accurate description of the structure and dynamics of interfacial water is essential for phospholipid membranes, since it determines their function and their interaction with other molecules. Here we consider water confined in stacked…

Soft Condensed Matter · Physics 2018-11-16 Sotiris Samatas , Carles Calero , Fausto Martelli , Giancarlo Franzese

Drainage in porous media can be broken down into two main mechanisms: a primary piston-like displacement of the interfaces through the bulk of pore bodies and throats, and a secondary slow flow through corners and films in the wake of the…

Transportation and distribution networks are a class of spatial networks that have been of interest in recent years. These networks are often characterized by the presence of complex structures such as central loops paired with peripheral…

Physics and Society · Physics 2023-01-23 Sebastiano Bontorin , Giulia Cencetti , Riccardo Gallotti , Bruno Lepri , Manlio De Domenico

We view a complex liquid as a network of bonds connecting each particle to its nearest neighbors; the dynamics of this network is a chain of discrete events signaling particles rearrangements. Within this picture, we studied a…

Disordered Systems and Neural Networks · Physics 2012-05-11 Alexander Z. Patashinski , Rafal Orlik , Antoni C. Mitus , Mark A. Ratner , Bartosz A. Grzybowski