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We present Graph Random Neural Features (GRNF), a novel embedding method from graph-structured data to real vectors based on a family of graph neural networks. The embedding naturally deals with graph isomorphism and preserves the metric…

Machine Learning · Computer Science 2020-06-03 Daniele Zambon , Cesare Alippi , Lorenzo Livi

We discuss the problem of embedding graphs in the plane with restrictions on the vertex mapping. In particular, we introduce a technique for drawing planar graphs with a fixed vertex mapping that bounds the number of times edges bend. An…

Computational Geometry · Computer Science 2012-06-05 Taylor Gordon

A merge tree is a fundamental topological structure used to capture the sub-level set (and similarly, super-level set) topology in scalar data analysis. The interleaving distance is a theoretically sound, stable metric for comparing merge…

Computational Geometry · Computer Science 2026-02-13 Althaf P , Amit Chattopadhyay , Osamu Saeki

We study the concept of the continuous mean distance of a weighted graph. For connected unweighted graphs, the mean distance can be defined as the arithmetic mean of the distances between all pairs of vertices. This parameter provides a…

Computational Geometry · Computer Science 2023-01-16 Delia Garijo , Alberto Márquez , Rodrigo I. Silveira

In this work, we propose trait-based merge trees a generalization of merge trees to feature level sets, targeting the analysis of tensor field or general multi-variate data. For this, we employ the notion of traits defined in attribute…

Machine Learning · Computer Science 2023-08-21 Jochen Jankowai , Talha Bin Masood , Ingrid Hotz

Important data mining problems such as nearest-neighbor search and clustering admit theoretical guarantees when restricted to objects embedded in a metric space. Graphs are ubiquitous, and clustering and classification over graphs arise in…

Combinatorics · Mathematics 2018-01-16 Jose Bento , Stratis Ioannidis

Graph embedding based on random-walks supports effective solutions for many graph-related downstream tasks. However, the abundance of embedding literature has made it increasingly difficult to compare existing methods and to identify…

Machine Learning · Computer Science 2021-10-26 Zexi Huang , Arlei Silva , Ambuj Singh

We introduce the tree distance, a new distance measure on graphs. The tree distance can be computed in polynomial time with standard methods from convex optimization. It is based on the notion of fractional isomorphism, a characterization…

Discrete Mathematics · Computer Science 2021-04-30 Jan Böker

Statistical analysis of a graph often starts with embedding, the process of representing its nodes as points in space. How to choose the embedding dimension is a nuanced decision in practice, but in theory a notion of true dimension is…

Machine Learning · Statistics 2021-01-06 Patrick Rubin-Delanchy

An added edge to a graph is called an inset edge. Predicting k inset edges which minimize the average distance of a graph is known to be NP-Hard. However, when k = 1 the complexity of the problem is polynomial. In this paper, some tools for…

Computational Complexity · Computer Science 2020-08-14 M. H. Khalifeh , A. -H. Esfahanian

Mapper graphs are widely used tools in topological data analysis and visualization. They can be understood as discrete approximations of Reeb graphs, providing insight into the shape and connectivity of complex data. Given a…

Computational Geometry · Computer Science 2026-04-17 Erin Wolf Chambers , Ishika Ghosh , Elizabeth Munch , Sarah Percival , Bei Wang

Neural embedding approaches have become a staple in the fields of computer vision, natural language processing, and more recently, graph analytics. Given the pervasive nature of these algorithms, the natural question becomes how to exploit…

Computation and Language · Computer Science 2020-10-27 Alexander Kalinowski , Yuan An

We introduce merge-width, a family of graph parameters that unifies several structural graph measures, including treewidth, degeneracy, twin-width, clique-width, and generalized coloring numbers. Our parameters are based on new…

Combinatorics · Mathematics 2025-02-26 Jan Dreier , Szymon Toruńczyk

Identifying and quantifying structural dissimilarities between complex networks is a fundamental and challenging problem in network science. Previous network comparison methods are based on the structural features, such as the length of…

Social and Information Networks · Computer Science 2021-11-29 Zhipeng Wang , Xiu-Xiu Zhan , Chuang Liu , Zi-Ke Zhang

Graphs are a representation of structured data that captures the relationships between sets of objects. With the ubiquity of available network data, there is increasing industrial and academic need to quickly analyze graphs with billions of…

Machine Learning · Computer Science 2023-07-28 Brandon Mayer , Anton Tsitsulin , Hendrik Fichtenberger , Jonathan Halcrow , Bryan Perozzi

Recently, one has seen a surge of interest in developing such methods including ones for learning such representations for (undirected) graphs (while preserving important properties). However, most of the work to date on embedding graphs…

Social and Information Networks · Computer Science 2018-11-30 Jiankai Sun , Srinivasan Parthasarathy

An obstacle representation of a graph is a mapping of the vertices onto points in the plane and a set of connected regions of the plane (called obstacles) such that the straight-line segment connecting the points corresponding to two…

We study the problem of distance-preserving graph compression for weighted paths and trees. The problem entails a weighted graph $G = (V, E)$ with non-negative weights, and a subset of edges $E^{\prime} \subset E$ which needs to be removed…

Data Structures and Algorithms · Computer Science 2024-09-19 Amirali Madani , Anil Maheshwari

We investigate the problem of constructing planar drawings with few bends for two related problems, the partially embedded graph problem---to extend a straight-line planar drawing of a subgraph to a planar drawing of the whole graph---and…

Computational Geometry · Computer Science 2014-10-31 Timothy M. Chan , Fabrizio Frati , Carsten Gutwenger , Anna Lubiw , Petra Mutzel , Marcus Schaefer

Graph embedding learns low-dimensional representations for nodes in a graph and effectively preserves the graph structure. Recently, a significant amount of progress has been made toward this emerging research area. However, there are…

Machine Learning · Computer Science 2019-05-20 Yuan Yin , Zhewei Wei
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