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This paper presents methods to compare networks where relationships between pairs of nodes in a given network are defined. We define such network distance by searching for the optimal method to embed one network into another network, prove…

Social and Information Networks · Computer Science 2018-02-14 Weiyu Huang , Alejandro Ribeiro

Graphs are versatile tools for representing structured data. As a result, a variety of machine learning methods have been studied for graph data analysis. Although many such learning methods depend on the measurement of differences between…

Machine Learning · Statistics 2021-06-18 Tomoki Yoshida , Ichiro Takeuchi , Masayuki Karasuyama

The Graph Edit Distance (GED) is an important metric for measuring the similarity between two (labeled) graphs. It is defined as the minimum cost required to convert one graph into another through a series of (elementary) edit operations.…

Databases · Computer Science 2025-11-05 Andrea D'Ascenzo , Julian Meffert , Petra Mutzel , Fabrizio Rossi

Let $G$ be a connected graph. The average distance of a vertex $v$ of $G$ is the arithmetic mean of the distances from $v$ to all other vertices of $G$. The proximity and remoteness of $G$ are defined as the minimum and maximum,…

Combinatorics · Mathematics 2025-08-15 Peter Dankelmann , Sonwabile Mafunda , Sufiyan Mallu

Floor plans depict building layouts and are often represented as graphs to capture the underlying spatial relationships. Comparison of these graphs is critical for applications like search, clustering, and data visualization. The most…

Computer Vision and Pattern Recognition · Computer Science 2025-09-05 Casper van Engelenburg , Jan van Gemert , Seyran Khademi

Random geometric graphs are random graph models defined on metric measure spaces. A random geometric graph is generated by first sampling points from a metric space and then connecting each pair of sampled points independently with a…

Probability · Mathematics 2025-11-10 Han Huang , Pakawut Jiradilok , Elchanan Mossel

The graph edit distance (GED) is a well-established distance measure widely used in many applications. However, existing methods for the GED computation suffer from several drawbacks including oversized search space, huge memory…

Data Structures and Algorithms · Computer Science 2017-10-02 Xiaoyang Chen , Hongwei Huo , Jun Huan , Jeffrey Scott Vitter

Random geometric graphs are random graph models defined on metric spaces. Such a model is defined by first sampling points from a metric space and then connecting each pair of sampled points with probability that depends on their distance,…

Machine Learning · Computer Science 2026-04-10 Han Huang , Pakawut Jiradilok , Elchanan Mossel

Among various distance functions for graphs, graph and subgraph edit distances (GED and SED respectively) are two of the most popular and expressive measures. Unfortunately, exact computations for both are NP-hard. To overcome this…

Machine Learning · Computer Science 2023-04-25 Rishabh Ranjan , Siddharth Grover , Sourav Medya , Venkatesan Chakaravarthy , Yogish Sabharwal , Sayan Ranu

Many recent results in combinatorics concern the relationship between the size of a set and the number of distances determined by pairs of points in the set. One extension of this question considers configurations within the set with a…

Combinatorics · Mathematics 2019-05-29 David M. Soukup

The associahedron $\mathcal{A}(G)$ of a graph $G$ has the property that its vertices can be thought of as the search trees on $G$ and its edges as the rotations between two search trees. If $G$ is a simple path, then $\mathcal{A}(G)$ is the…

Combinatorics · Mathematics 2023-11-28 Jean Cardinal , Lionel Pournin , Mario Valencia-Pabon

Graph comparison is fundamentally important for many applications such as the analysis of social networks and biological data and has been a significant research area in the pattern recognition and pattern analysis domains. Nowadays, the…

Data Structures and Algorithms · Computer Science 2015-02-27 Hamida Seba , Sofiane Lagraa , Elsen Ronando

Graph embedding methods are becoming increasingly popular in the machine learning community, where they are widely used for tasks such as node classification and link prediction. Embedding graphs in geometric spaces should aid the…

Current Graph Neural Networks (GNN) architectures generally rely on two important components: node features embedding through message passing, and aggregation with a specialized form of pooling. The structural (or topological) information…

Machine Learning · Computer Science 2022-06-01 Cédric Vincent-Cuaz , Rémi Flamary , Marco Corneli , Titouan Vayer , Nicolas Courty

Graph matching can be formalized as a combinatorial optimization problem, where there are corresponding relationships between pairs of nodes that can be represented as edges. This problem becomes challenging when there are potential…

Computer Vision and Pattern Recognition · Computer Science 2023-01-06 Dongdong Chen , Yuxing Dai , Lichi Zhang , Zhihong Zhang

Graph matching consists of aligning the vertices of two unlabeled graphs in order to maximize the shared structure across networks; when the graphs are unipartite, this is commonly formulated as minimizing their edge disagreements. In this…

Machine Learning · Statistics 2021-04-13 Jesús Arroyo , Carey E. Priebe , Vince Lyzinski

Graph embedding is a powerful method in parallel computing that maps a guest network $G$ into a host network $H$. The performance of an embedding can be evaluated by certain parameters, such as the dilation, the edge congestion and the…

Complex systems, ranging from soft materials to wireless communication, are often organised as random geometric networks in which nodes and edges evenly fill up the volume of some space. Studying such networks is difficult because they…

Probability · Mathematics 2022-07-19 Ivan Kryven , Rik Versendaal

This paper addresses the challenging problem of retrieval and matching of graph structured objects, and makes two key contributions. First, we demonstrate how Graph Neural Networks (GNN), which have emerged as an effective model for various…

Machine Learning · Computer Science 2019-05-14 Yujia Li , Chenjie Gu , Thomas Dullien , Oriol Vinyals , Pushmeet Kohli

We describe the structure of the graphs with the smallest average distance and the largest average clustering given their order and size. There is usually a unique graph with the largest average clustering, which at the same time has the…

Molecular Networks · Quantitative Biology 2010-07-28 Dionysios Barmpoutis , Richard M. Murray
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