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Morse complexes are gradient-based topological descriptors with close connections to Morse theory. They are widely applicable in scientific visualization as they serve as important abstractions for gaining insights into the topology of…

Graphics · Computer Science 2019-12-16 Tushar Athawale , Dan Maljovec , Chris R. Johnson , Valerio Pascucci , Bei Wang

Sparse autoencoders (SAEs) have emerged as a powerful tool for uncovering interpretable features in large language models (LLMs) through the sparse directions they learn. However, the sheer number of extracted directions makes comprehensive…

Computation and Language · Computer Science 2025-11-11 Xinyuan Yan , Shusen Liu , Kowshik Thopalli , Bei Wang

Cellular electron cryo-tomography enables the 3D visualization of cellular organization in the near-native state and at submolecular resolution. However, the contents of cellular tomograms are often complex, making it difficult to…

Quantitative Methods · Quantitative Biology 2017-12-29 Xiangrui Zeng , Miguel Ricardo Leung , Tzviya Zeev-Ben-Mordehai , Min Xu

We consider the problem of efficiently computing a discrete Morse complex on simplicial complexes of arbitrary dimension and very large size. Based on a common graph-based formalism, we analyze existing data structures for simplicial…

Computational Geometry · Computer Science 2018-11-13 Ulderico Fugacci , Federico Iuricich , Leila De Floriani

This paper proposes a novel deep subspace clustering approach which uses convolutional autoencoders to transform input images into new representations lying on a union of linear subspaces. The first contribution of our work is to insert…

Computer Vision and Pattern Recognition · Computer Science 2020-01-24 Mohsen Kheirandishfard , Fariba Zohrizadeh , Farhad Kamangar

The Morse-Smale complex of a function $f$ decomposes the sample space into cells where $f$ is increasing or decreasing. When applied to nonparametric density estimation and regression, it provides a way to represent, visualize, and compare…

Statistics Theory · Mathematics 2017-04-05 Yen-Chi Chen , Christopher R. Genovese , Larry Wasserman

The Morse-Smale complex is a standard tool in visual data analysis. The classic definition is based on a continuous view of the gradient of a scalar function where its zeros are the critical points. These points are connected via gradient…

Computational Geometry · Computer Science 2024-09-10 Son Le Thanh , Michael Ankele , Tino Weinkauf

This paper addresses the issue of building a part-based representation of a dataset of images. More precisely, we look for a non-negative, sparse decomposition of the images on a reduced set of atoms, in order to unveil a morphological and…

Computer Vision and Pattern Recognition · Computer Science 2019-04-04 Bastien Ponchon , Santiago Velasco-Forero , Samy Blusseau , Jesus Angulo , Isabelle Bloch

Analyzing and visualizing scientific ensemble datasets with high dimensionality and complexity poses significant challenges. Dimensionality reduction techniques and autoencoders are powerful tools for extracting features, but they often…

Machine Learning · Computer Science 2026-01-19 Hamid Gadirov , Lennard Manuel , Steffen Frey

In the remote sensing context spectral unmixing is a technique to decompose a mixed pixel into two fundamental representatives: endmembers and abundances. In this paper, a novel architecture is proposed to perform blind unmixing on…

Computer Vision and Pattern Recognition · Computer Science 2020-11-19 Yasiru Ranasinghe , Sanjaya Herath , Kavinga Weerasooriya , Mevan Ekanayake , Roshan Godaliyadda , Parakrama Ekanayake , Vijitha Herath

Topological abstractions offer a method to summarize the behavior of vector fields but computing them robustly can be challenging due to numerical precision issues. One alternative is to represent the vector field using a discrete approach,…

Graphics · Computer Science 2025-12-09 Tanner Finken , Julien Tierny , Joshua A Levine

In this paper, we present a novel neuroevolutionary method to identify the architecture and hyperparameters of convolutional autoencoders. Remarkably, we used a hypervolume indicator in the context of neural architecture search for…

Neural and Evolutionary Computing · Computer Science 2021-06-23 Daniel Dimanov , Emili Balaguer-Ballester , Colin Singleton , Shahin Rostami

Autoencoding is a popular method in representation learning. Conventional autoencoders employ symmetric encoding-decoding procedures and a simple Euclidean latent space to detect hidden low-dimensional structures in an unsupervised way.…

Machine Learning · Computer Science 2024-10-07 Stefan C. Schonsheck , Scott Mahan , Timo Klock , Alexander Cloninger , Rongjie Lai

Graphs are ubiquitous data structures for representing interactions between entities. With an emphasis on the use of graphs to represent chemical molecules, we explore the task of learning to generate graphs that conform to a distribution…

Machine Learning · Computer Science 2019-03-08 Qi Liu , Miltiadis Allamanis , Marc Brockschmidt , Alexander L. Gaunt

The Linear Representation Hypothesis asserts that the embeddings learned by neural networks can be understood as linear combinations of features corresponding to high-level concepts. Based on this ansatz, sparse autoencoders (SAEs) have…

Machine Learning · Computer Science 2026-01-29 Chiraag Kaushik , Davis Barch , Andrea Fanelli

In this paper, we focus on the problem of identifying semantic factors of variation in large image datasets. By training a convolutional Autoencoder on the image data, we create encodings, which describe each datapoint at a higher level of…

Computer Vision and Pattern Recognition · Computer Science 2019-10-08 Ilja Manakov , Volker Tresp

Integrating high-level semantically correlated contents and low-level anatomical features is of central importance in medical image segmentation. Towards this end, recent deep learning-based medical segmentation methods have shown great…

Computer Vision and Pattern Recognition · Computer Science 2023-07-19 Chenyu You , Weicheng Dai , Yifei Min , Lawrence Staib , James S. Duncan

Visual localization techniques rely upon some underlying scene representation to localize against. These representations can be explicit such as 3D SFM map or implicit, such as a neural network that learns to encode the scene. The former…

Computer Vision and Pattern Recognition · Computer Science 2024-06-13 Maxime Pietrantoni , Gabriela Csurka , Martin Humenberger , Torsten Sattler

In quantised autoencoders, images are usually split into local patches, each encoded by one token. This representation is redundant in the sense that the same number of tokens is spend per region, regardless of the visual information…

Computer Vision and Pattern Recognition · Computer Science 2024-08-06 Tim Elsner , Paula Usinger , Victor Czech , Gregor Kobsik , Yanjiang He , Isaak Lim , Leif Kobbelt

We propose an auto-encoder architecture for multi-texture synthesis. The approach relies on both a compact encoder accounting for second order neural statistics and a generator incorporating adaptive periodic content. Images are embedded in…

Computer Vision and Pattern Recognition · Computer Science 2023-06-30 Pierrick Chatillon , Yann Gousseau , Sidonie Lefebvre
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