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Autoencoding has achieved great empirical success as a framework for learning generative models for natural images. Autoencoders often use generic deep networks as the encoder or decoder, which are difficult to interpret, and the learned…

Computer Vision and Pattern Recognition · Computer Science 2023-02-21 Xili Dai , Ke Chen , Shengbang Tong , Jingyuan Zhang , Xingjian Gao , Mingyang Li , Druv Pai , Yuexiang Zhai , XIaojun Yuan , Heung-Yeung Shum , Lionel M. Ni , Yi Ma

We propose a principled method for autoencoding with random forests. Our strategy builds on foundational results from nonparametric statistics and spectral graph theory to learn a low-dimensional embedding of the model that optimally…

Machine Learning · Statistics 2026-01-16 Binh Duc Vu , Jan Kapar , Marvin Wright , David S. Watson

Existing interactive visualization tools for deep learning are mostly applied to the training, debugging, and refinement of neural network models working on natural images. However, visual analytics tools are lacking for the specific…

Computer Vision and Pattern Recognition · Computer Science 2020-09-07 Xinyi Huang , Suphanut Jamonnak , Ye Zhao , Boyu Wang , Minh Hoai , Kevin Yager , Wei Xu

Most multi-view clustering methods are limited by shallow models without sound nonlinear information perception capability, or fail to effectively exploit complementary information hidden in different views. To tackle these issues, we…

Machine Learning · Computer Science 2022-10-14 Fu Lele , Zhang Lei , Yang Jinghua , Chen Chuan , Zhang Chuanfu , Zheng Zibin

We present an application of autoencoders to the problem of noise reduction in single-shot astronomical images and explore its suitability for upcoming large-scale surveys. Autoencoders are a machine learning model that summarises an input…

Instrumentation and Methods for Astrophysics · Physics 2023-03-08 Oliver. J. Bartlett , David. M. Benoit , Kevin. A. Pimbblet , Brooke Simmons , Laura Hunt

We present the self-encoder, a neural network trained to guess the identity of each data sample. Despite its simplicity, it learns a very useful representation of data, in a self-supervised way. Specifically, the self-encoder learns to…

Machine Learning · Computer Science 2023-06-27 Armand Boschin , Thomas Bonald , Marc Jeanmougin

We present an autoencoder that leverages learned representations to better measure similarities in data space. By combining a variational autoencoder with a generative adversarial network we can use learned feature representations in the…

Machine Learning · Computer Science 2016-02-12 Anders Boesen Lindbo Larsen , Søren Kaae Sønderby , Hugo Larochelle , Ole Winther

Large-scale numerical simulations often produce high-dimensional gridded data that is challenging to process for downstream applications. A prime example is numerical weather prediction, where atmospheric processes are modeled using…

Machine Learning · Computer Science 2025-02-10 Jieyu Chen , Kevin Höhlein , Sebastian Lerch

We rely on the framework of Morse sequences to enable the direct computation of gradient vector fields on simplicial complexes. A Morse sequence is a filtration from a subcomplex $L$ to a complex $K$ via elementary expansions and fillings,…

Discrete Mathematics · Computer Science 2025-09-09 Gilles Bertrand , Laurent Najman

Feature selection is a dimensionality reduction technique that selects a subset of representative features from high dimensional data by eliminating irrelevant and redundant features. Recently, feature selection combined with sparse…

Computer Vision and Pattern Recognition · Computer Science 2018-04-24 Siwei Feng , Marco F. Duarte

This extended abstract presents a visualization system, which is designed for domain scientists to visually understand their deep learning model of extracting multiple attributes in x-ray scattering images. The system focuses on studying…

Machine Learning · Computer Science 2019-10-11 Xinyi Huang , Suphanut Jamonnak , Ye Zhao , Boyu Wang , Minh Hoai , Kevin Yager , Wei Xu

Scientific archives now contain hundreds of petabytes of data across genomics, ecology, climate, and molecular biology that could reveal undiscovered patterns if systematically analyzed at scale. Large-scale, weakly-supervised datasets in…

Computer Vision and Pattern Recognition · Computer Science 2025-11-25 Samuel Stevens , Jacob Beattie , Tanya Berger-Wolf , Yu Su

3D shape analysis is an important research topic in computer vision and graphics. While existing methods have generalized image-based deep learning to meshes using graph-based convolutions, the lack of an effective pooling operation…

Graphics · Computer Science 2019-08-08 Yu-Jie Yuan , Yu-Kun Lai , Jie Yang , Hongbo Fu , Lin Gao

Deep networks can be trained to map images into a low-dimensional latent space. In many cases, different images in a collection are articulated versions of one another; for example, same object with different lighting, background, or pose.…

Computer Vision and Pattern Recognition · Computer Science 2023-03-14 Rakib Hyder , M. Salman Asif

In this work we introduce an Autoencoder for molecular conformations. Our proposed model converts the discrete spatial arrangements of atoms in a given molecular graph (conformation) into and from a continuous fixed-sized latent…

Machine Learning · Computer Science 2021-01-06 Robin Winter , Frank Noé , Djork-Arné Clevert

Sparse autoencoders have recently produced dictionaries of high-dimensional vectors corresponding to the universe of concepts represented by large language models. We find that this concept universe has interesting structure at three…

Neurons and Cognition · Quantitative Biology 2025-04-01 Yuxiao Li , Eric J. Michaud , David D. Baek , Joshua Engels , Xiaoqing Sun , Max Tegmark

We present BRICS, a bi-level feature representation for image collections, which consists of a key code space on top of a feature grid space. Specifically, our representation is learned by an autoencoder to encode images into continuous key…

Computer Vision and Pattern Recognition · Computer Science 2024-01-02 Dingdong Yang , Yizhi Wang , Ali Mahdavi-Amiri , Hao Zhang

We present AstroVaDEr, a variational autoencoder designed to perform unsupervised clustering and synthetic image generation using astronomical imaging catalogues. The model is a convolutional neural network that learns to embed images into…

Instrumentation and Methods for Astrophysics · Physics 2020-12-02 Ashley Spindler , James E. Geach , Michael J. Smith

Visualization and topic modeling are widely used approaches for text analysis. Traditional visualization methods find low-dimensional representations of documents in the visualization space (typically 2D or 3D) that can be displayed using a…

Computation and Language · Computer Science 2020-10-27 Dang Pham , Tuan M. V. Le

Visualizations of set systems frequently use enclosing geometries for the sets in combination with reduced representations of the elements, such as short text labels, small glyphs, or points. Hence they are generally unable to adequately…

Computational Geometry · Computer Science 2025-12-23 Neda Novakova , Veselin Todorov , Steven van den Broek , Tim Dwyer , Bettina Speckmann