English
Related papers

Related papers: Modelling tree survival for investigating climate …

200 papers

Further to the proposal and application of a stochastic methodology and the resulting first exit time distribution function to life table data we introduce a theoretical framework for the estimation of the maximum deterioration age and to…

Populations and Evolution · Quantitative Biology 2011-10-04 Christos H Skiadas

While there are many well-developed data science methods for classification and regression, there are relatively few methods for working with right-censored data. Here, we present "survival stacking": a method for casting survival analysis…

Methodology · Statistics 2021-07-29 Erin Craig , Chenyang Zhong , Robert Tibshirani

Forward-time models of diversification (i.e., speciation and extinction) produce phylogenetic trees that grow "vertically" as time goes by. Pruning the extinct lineages out of such trees leads to natural models for reconstructed trees…

Populations and Evolution · Quantitative Biology 2013-08-07 Amaury Lambert , Tanja Stadler

Few problems in statistics are as perplexing as variable selection in the presence of very many redundant covariates. The variable selection problem is most familiar in parametric environments such as the linear model or additive variants…

Methodology · Statistics 2021-02-25 Yi Liu , Veronika Ročková , Yuexi Wang

1. Climate change is altering plant phenology globally with potential deleterious impacts on animal species and entire ecosystems, yet the long-term effects of climate change on tropical leaf production remain poorly understood. 2. We…

Quantitative Methods · Quantitative Biology 2026-04-01 Laura Lüthy , Colin A. Chapman , Patrick Lauer , Patrick Omeja , Urs Kalbitzer

In this investigation we study the effects of climate change on predator-prey population dynamics. The interaction of predator and prey is described by the Variable Territory (VT) model with Allee effects in an Ordinary Differential…

Populations and Evolution · Quantitative Biology 2018-05-31 Sylvain Gretchko , Jessa Marley , Rebecca C. Tyson

In epidemiological studies of air pollution and public health, estimating the health impact of exposure to air pollution may be hindered by the unknown functional form of the exposure-outcome association and by unmeasured confounding…

Methodology · Statistics 2026-01-28 Carlo Zaccardi , Pasquale Valentini , Luigi Ippoliti , Alexandra M. Schmidt

The influence of climate on biodiversity is an important ecological question. Various theories try to link climate change to allelic richness and therefore to predict the impact of global warming on genetic diversity. We model the…

Applications · Statistics 2008-07-17 Liliane Bel , Avner Bar-Hen , Rachid Cheddadi , Rémy Petit

This article introduces a flexible and adaptive nonparametric method for estimating the association between multiple covariates and power spectra of multiple time series. The proposed approach uses a Bayesian sum of trees model to capture…

Methodology · Statistics 2021-10-01 Yakun Wang , Zeda Li , Scott A. Bruce

Machine learning models deployed in real-world settings must operate under evolving data distributions and constrained computational resources. This challenge is particularly acute in non-stationary domains such as energy time series,…

Machine Learning · Computer Science 2026-03-17 Daniel Bretsko , Piotr Walas , Devashish Khulbe , Sebastian Stros , Stanislav Sobolevsky , Tomas Satura

This paper explores foundational and applied aspects of survival analysis, using fall risk assessment as a case study. It revisits key time-related probability distributions and statistical methods, including logistic regression, Poisson…

Machine Learning · Computer Science 2025-01-07 Tianhua Chen

We show that a coalescence equation exhibits a variety of critical behaviors, depending on the initial condition. This equation was introduced a few years ago to understand a toy model {studied by Derrida and Retaux to mimic} the depinning…

Mathematical Physics · Physics 2020-06-24 Xinxing Chen , Victor Dagard , Bernard Derrida , Zhan Shi

Plastic deformation is mediated by the creation and movement of dislocations, and at high stress the latter is dominated by dislocation drag from phonon wind. By simulating a 1-D shock impact problem we analyze the importance of accurately…

Materials Science · Physics 2021-06-15 Daniel N. Blaschke , Darby J. Luscher

Self-organized spatial patterns of vegetation are frequent in drylands and, because pattern shape correlates with water availability, they have been suggested as important indicators of ecosystem health. However, the mechanisms underlying…

Species tree estimation is a complex problem, due to the fact that different parts of the genome can have different evolutionary histories than the genome itself. One of the causes for this discord is incomplete lineage sorting (also called…

Populations and Evolution · Quantitative Biology 2019-04-09 Erin Molloy , Tandy Warnow

Fixed tree topologies are widely used in phylodynamic analyses to reduce computational burden, yet the consequences of this assumption remain insufficiently understood. Here, we systematically assess the impact of various fixed-topology…

Populations and Evolution · Quantitative Biology 2025-12-01 Mathieu Fourment , Jiansi Gao , Marc A Suchard , Frederick A Matsen

One of the most common ways researchers compare survival outcomes across treatments when confounding is present is using Cox regression. This model is limited by its underlying assumption of proportional hazards; in some cases, substantial…

Applications · Statistics 2021-02-02 Elizabeth A. Handorf , Marc Smaldone , Sujana Movva , Nandita Mitra

A stochastic forest model of young and old age class trees is studied. First, we prove existence, uniqueness and boundedness of global nonnegative solutions. Second, we investigate asymptotic behavior of solutions by giving a sufficient…

Probability · Mathematics 2016-11-15 Ton Viet Ta , Linh Thi Hoai Nguyen , Atsushi Yagi

A random forest prediction can be computed by the scalar product of the labels of the training examples and a set of weights that are determined by the leafs of the forest into which the test object falls; each prediction can hence be…

Machine Learning · Computer Science 2023-11-27 Henrik Boström

Air pollution is the world's largest environmental risk factor for human disease and premature death, resulting in more than 6 million permature deaths in 2019. Currently, there is still a challenge to model one of the most important air…